CircRNA Information

General Information
circRNA Basic Information
CircID chr3:37984140|37984303
Strand +
CircType exon
Host Gene ENSG00000144677.13;
Algorism CIRI2;
Sequence ACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCCTGGGAGAATGGAACAGGAACAGACATGATCAAAGTTACAGTACAGTAGGAACAGAGGCAGCCAGCCAATTTTGCACAGTTAACTGCAAGTACGTCAAGCCATTCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:37984140|37984303 hsa-miR-19a-5p 0 0 1
chr3:37984140|37984303 hsa-miR-19a-3p 0 0 1
chr3:37984140|37984303 hsa-miR-150-5p 0 0 1
chr3:37984140|37984303 hsa-miR-150-3p 0 0 1
chr3:37984140|37984303 hsa-miR-135b-5p 0 0 1
chr3:37984140|37984303 hsa-miR-135b-3p 0 0 1
chr3:37984140|37984303 hsa-miR-604 0 0 1
chr3:37984140|37984303 hsa-miR-620 0 0 1
chr3:37984140|37984303 hsa-miR-647 0 1 1
chr3:37984140|37984303 hsa-miR-708-5p 0 0 1
chr3:37984140|37984303 hsa-miR-708-3p 0 0 1
chr3:37984140|37984303 hsa-miR-665 1 0 1
chr3:37984140|37984303 hsa-miR-942-5p 0 0 1
chr3:37984140|37984303 hsa-miR-942-3p 0 0 1
chr3:37984140|37984303 hsa-miR-1183 0 0 1
chr3:37984140|37984303 hsa-miR-1205 0 0 1
chr3:37984140|37984303 hsa-miR-1257 0 0 1
chr3:37984140|37984303 hsa-miR-1270 0 0 1
chr3:37984140|37984303 hsa-miR-532-3p 0 0 1
chr3:37984140|37984303 hsa-miR-1184 0 0 1
chr3:37984140|37984303 hsa-miR-361-3p 0 0 1
chr3:37984140|37984303 hsa-miR-28-5p 0 0 1
chr3:37984140|37984303 hsa-miR-654-3p 0 0 1
chr3:37984140|37984303 hsa-miR-362-3p 0 0 1
chr3:37984140|37984303 hsa-miR-138 0 0 1
chr3:37984140|37984303 hsa-miR-135a 0 0 1
chr3:37984140|37984303 hsa-miR-19b 0 0 1
chr3:37984140|37984303 hsa-miR-329 0 0 1
chr3:37984140|37984303 hsa-miR-1826 0 0 1
chr3:37984140|37984303 hsa-miR-4254 1 0 0
chr3:37984140|37984303 hsa-miR-4286 0 1 0
chr3:37984140|37984303 hsa-miR-103a-2-5p 0 1 0
chr3:37984140|37984303 hsa-miR-432-3p 1 0 0
chr3:37984140|37984303 hsa-miR-6840-3p 1 1 0
chr3:37984140|37984303 hsa-miR-1273h-3p 0 1 0
chr3:37984140|37984303 hsa-miR-6892-3p 1 1 0
chr3:37984140|37984303 hsa-miR-145-5p 1 0 0
chr3:37984140|37984303 hsa-miR-6842-3p 1 1 0
chr3:37984140|37984303 hsa-miR-4728-3p 1 0 0
chr3:37984140|37984303 hsa-miR-6882-3p 1 1 0
chr3:37984140|37984303 hsa-miR-6516-5p 0 1 0
chr3:37984140|37984303 hsa-miR-1266-3p 1 1 0
chr3:37984140|37984303 hsa-miR-3158-5p 0 1 0
chr3:37984140|37984303 hsa-miR-3120-5p 1 0 0
chr3:37984140|37984303 hsa-miR-4687-5p 1 0 0
chr3:37984140|37984303 hsa-miR-6730-3p 0 1 0
chr3:37984140|37984303 hsa-miR-24-2-5p 1 1 0
chr3:37984140|37984303 hsa-miR-3074-5p 1 1 0
chr3:37984140|37984303 hsa-miR-6865-3p 0 1 0
chr3:37984140|37984303 hsa-miR-6777-3p 1 0 0
chr3:37984140|37984303 hsa-miR-7152-5p 0 1 0
chr3:37984140|37984303 hsa-miR-4750-3p 0 1 0
chr3:37984140|37984303 hsa-miR-5587-3p 0 1 0
chr3:37984140|37984303 hsa-miR-888-3p 0 1 0
chr3:37984140|37984303 hsa-miR-4771 0 1 0
chr3:37984140|37984303 hsa-miR-3152-5p 1 1 0
chr3:37984140|37984303 hsa-miR-3620-5p 1 0 0
chr3:37984140|37984303 hsa-miR-6791-5p 1 0 0
chr3:37984140|37984303 hsa-miR-7107-3p 0 1 0
chr3:37984140|37984303 hsa-miR-6805-3p 1 0 0
chr3:37984140|37984303 hsa-miR-3085-3p 0 1 0
chr3:37984140|37984303 hsa-miR-1234-3p 1 0 0
chr3:37984140|37984303 hsa-miR-6876-3p 0 1 0
chr3:37984140|37984303 hsa-miR-103a-1-5p 0 1 0
chr3:37984140|37984303 hsa-miR-329-3p 0 1 0
chr3:37984140|37984303 hsa-miR-6855-3p 0 1 0
chr3:37984140|37984303 hsa-miR-5571-5p 0 1 0
chr3:37984140|37984303 hsa-miR-195-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:37984140|37984303
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MGEWNRNRHDQSYSTVGTEAASQFCTVNCKYVKPFT
Nucleotide Sequence CTGGGAGAATGGAACAGGAACAGACATGATCAAAGTTACAGTACAGTAGGAACAGAGGCAGCCAGCCAATTTTGCACAGTTAACTGCAAGTACGTCAAGCCATTCACT

CircID chr3:37984140|37984303
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MAGCLCSYCTVTLIMSVPVPFSQELLCRLTHPPPPRVVEML
Nucleotide Sequence TTGGCTGGCTGCCTCTGTTCCTACTGTACTGTAACTTTGATCATGTCTGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG

CircID chr3:37984140|37984303
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MCKIGWLPLFLLYCNFDHVCSCSILPGASLQTDTPSPTPGSGDAG
Nucleotide Sequence CTGTGCAAAATTGGCTGGCTGCCTCTGTTCCTACTGTACTGTAACTTTGATCATGTCTGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites