CircRNA Information

General Information
circRNA Basic Information
CircID chr3:38141757|38141893
Strand -
CircType exon
Host Gene ENSG00000172936.11;
Algorism CIRI2;
Sequence CACGACACTGCTGGGGCAGCTTCTTCCACAGTGATGCCTACTGATGCTTCAGTGCCTCTGCACACCGCCCATTCCACTTCCTCCTTCCCCACAGGGCAGGTGGGGAAGCAGTTTGGCCCAGCCCAAGGAGACCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:38141757|38141893 hsa-miR-22-5p 0 0 1
chr3:38141757|38141893 hsa-miR-22-3p 0 0 1
chr3:38141757|38141893 hsa-miR-206 0 0 1
chr3:38141757|38141893 hsa-miR-613 0 0 1
chr3:38141757|38141893 hsa-miR-635 0 0 1
chr3:38141757|38141893 hsa-miR-874-5p 0 0 1
chr3:38141757|38141893 hsa-miR-874-3p 0 0 1
chr3:38141757|38141893 hsa-miR-936 0 0 1
chr3:38141757|38141893 hsa-miR-1208 0 0 1
chr3:38141757|38141893 hsa-miR-491-5p 0 0 1
chr3:38141757|38141893 hsa-miR-615-5p 1 0 1
chr3:38141757|38141893 hsa-miR-146b-3p 0 0 1
chr3:38141757|38141893 hsa-miR-1224-3p 0 1 1
chr3:38141757|38141893 hsa-miR-199b-3p 0 0 1
chr3:38141757|38141893 hsa-miR-199a-3p 0 0 1
chr3:38141757|38141893 hsa-miR-324-3p 0 0 1
chr3:38141757|38141893 hsa-miR-516a-3p 0 0 1
chr3:38141757|38141893 hsa-miR-7 0 0 1
chr3:38141757|38141893 hsa-miR-1 0 0 1
chr3:38141757|38141893 hsa-miR-325 1 0 0
chr3:38141757|38141893 hsa-miR-608 1 0 0
chr3:38141757|38141893 hsa-miR-648 1 1 0
chr3:38141757|38141893 hsa-miR-3197 1 0 0
chr3:38141757|38141893 hsa-miR-4271 1 1 0
chr3:38141757|38141893 hsa-miR-1268b 1 0 0
chr3:38141757|38141893 hsa-miR-3689c 1 0 0
chr3:38141757|38141893 hsa-miR-4492 0 1 0
chr3:38141757|38141893 hsa-miR-4506 1 0 0
chr3:38141757|38141893 hsa-miR-2392 1 0 0
chr3:38141757|38141893 hsa-miR-4507 1 1 0
chr3:38141757|38141893 hsa-miR-4510 0 1 0
chr3:38141757|38141893 hsa-miR-4533 1 1 0
chr3:38141757|38141893 hsa-miR-1587 1 1 0
chr3:38141757|38141893 hsa-miR-4651 1 0 0
chr3:38141757|38141893 hsa-miR-4654 1 0 0
chr3:38141757|38141893 hsa-miR-4657 1 0 0
chr3:38141757|38141893 hsa-miR-4739 1 1 0
chr3:38141757|38141893 hsa-miR-6090 1 0 0
chr3:38141757|38141893 hsa-miR-6127 1 1 0
chr3:38141757|38141893 hsa-miR-6130 0 1 0
chr3:38141757|38141893 hsa-miR-6133 1 0 0
chr3:38141757|38141893 hsa-miR-8085 1 0 0
chr3:38141757|38141893 hsa-miR-12115 1 0 0
chr3:38141757|38141893 hsa-miR-12118 0 1 0
chr3:38141757|38141893 hsa-miR-12119 1 0 0
chr3:38141757|38141893 hsa-miR-4433b-3p 1 0 0
chr3:38141757|38141893 hsa-miR-6734-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6747-5p 1 0 0
chr3:38141757|38141893 hsa-miR-7106-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6825-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6894-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6857-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6799-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6728-5p 1 0 0
chr3:38141757|38141893 hsa-miR-8071 1 0 0
chr3:38141757|38141893 hsa-miR-766-5p 0 1 0
chr3:38141757|38141893 hsa-miR-7114-5p 0 1 0
chr3:38141757|38141893 hsa-miR-7847-3p 1 0 0
chr3:38141757|38141893 hsa-miR-4695-5p 1 0 0
chr3:38141757|38141893 hsa-miR-593-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6806-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6759-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6716-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6796-5p 1 1 0
chr3:38141757|38141893 hsa-miR-3190-3p 0 1 0
chr3:38141757|38141893 hsa-miR-6805-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6798-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6760-5p 1 0 0
chr3:38141757|38141893 hsa-miR-2467-3p 1 1 0
chr3:38141757|38141893 hsa-miR-6782-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6821-5p 1 0 0
chr3:38141757|38141893 hsa-miR-5008-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6786-5p 1 0 0
chr3:38141757|38141893 hsa-miR-939-3p 1 0 0
chr3:38141757|38141893 hsa-miR-3944-3p 1 0 0
chr3:38141757|38141893 hsa-miR-1229-5p 1 0 0
chr3:38141757|38141893 hsa-miR-193b-5p 1 0 0
chr3:38141757|38141893 hsa-miR-1228-5p 1 1 0
chr3:38141757|38141893 hsa-miR-6771-5p 1 0 0
chr3:38141757|38141893 hsa-miR-92b-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6847-5p 1 0 0
chr3:38141757|38141893 hsa-miR-149-3p 1 0 0
chr3:38141757|38141893 hsa-miR-193a-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6824-5p 1 0 0
chr3:38141757|38141893 hsa-miR-3162-5p 1 0 0
chr3:38141757|38141893 hsa-miR-1207-5p 1 0 0
chr3:38141757|38141893 hsa-miR-1233-5p 1 0 0
chr3:38141757|38141893 hsa-miR-3689b-3p 1 0 0
chr3:38141757|38141893 hsa-miR-4763-3p 1 0 0
chr3:38141757|38141893 hsa-miR-6778-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6812-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6870-5p 1 0 0
chr3:38141757|38141893 hsa-miR-5001-5p 0 1 0
chr3:38141757|38141893 hsa-miR-6737-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6752-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6754-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6756-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6803-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6819-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6851-5p 1 0 0
chr3:38141757|38141893 hsa-miR-7110-5p 1 0 0
chr3:38141757|38141893 hsa-miR-11181-3p 1 0 0
chr3:38141757|38141893 hsa-miR-1249-5p 1 1 0
chr3:38141757|38141893 hsa-miR-6774-5p 0 1 0
chr3:38141757|38141893 hsa-miR-6780a-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6797-5p 1 0 0
chr3:38141757|38141893 hsa-miR-7111-5p 1 0 0
chr3:38141757|38141893 hsa-miR-3620-5p 1 1 0
chr3:38141757|38141893 hsa-miR-4728-5p 1 0 0
chr3:38141757|38141893 hsa-miR-5196-5p 1 1 0
chr3:38141757|38141893 hsa-miR-6780b-5p 1 1 0
chr3:38141757|38141893 hsa-miR-1237-5p 1 0 0
chr3:38141757|38141893 hsa-miR-4649-5p 1 0 0
chr3:38141757|38141893 hsa-miR-4725-3p 1 1 0
chr3:38141757|38141893 hsa-miR-6794-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6858-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6883-5p 1 0 0
chr3:38141757|38141893 hsa-miR-1238-5p 1 0 0
chr3:38141757|38141893 hsa-miR-4758-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6856-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6855-5p 1 0 0
chr3:38141757|38141893 hsa-miR-3173-3p 0 1 0
chr3:38141757|38141893 hsa-miR-4747-5p 1 1 0
chr3:38141757|38141893 hsa-miR-6891-5p 0 1 0
chr3:38141757|38141893 hsa-miR-6785-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6849-5p 1 0 0
chr3:38141757|38141893 hsa-miR-769-3p 1 0 0
chr3:38141757|38141893 hsa-miR-3619-5p 1 0 0
chr3:38141757|38141893 hsa-miR-6843-3p 1 0 0
chr3:38141757|38141893 hsa-miR-4676-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:38141757|38141893
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MPTDASVPLHTAHSTSSFPTGQVGKQFGPAQGDP
Nucleotide Sequence ATGCCTACTGATGCTTCAGTGCCTCTGCACACCGCCCATTCCACTTCCTCCTTCCCCACAGGGCAGGTGGGGAAGCAGTTTGGCCCAGCCCAAGGAGACCCC

CircID chr3:38141757|38141893
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MMLQCLCTPPIPLPPSPQGRWGSSLAQPKETP
Nucleotide Sequence CTGATGCTTCAGTGCCTCTGCACACCGCCCATTCCACTTCCTCCTTCCCCACAGGGCAGGTGGGGAAGCAGTTTGGCCCAGCCCAAGGAGACCCCA

CircID chr3:38141757|38141893
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGQTASPPALWGRRKWNGRCAEALKHQ
Nucleotide Sequence CTGGGCCAAACTGCTTCCCCACCTGCCCTGTGGGGAAGGAGGAAGTGGAATGGGCGGTGTGCAGAGGCACTGAAGCATCAGTAG

CircID chr3:38141757|38141893
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MGWAKLLPHLPCGEGGSGMGGVQRH
Nucleotide Sequence TTGGGCTGGGCCAAACTGCTTCCCCACCTGCCCTGTGGGGAAGGAGGAAGTGGAATGGGCGGTGTGCAGAGGCACTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites