CircRNA Information

General Information
circRNA Basic Information
CircID chr3:39097698|39097843
Strand +
CircType exon
Host Gene ENSG00000114745.12;
Algorism CIRI2;
Sequence ACTGAGTCCTCTGTCATGTGTCCTTGTCCCTAGGCTACAATGCTACACTTGGCTCAGGCTGATCACCATGCTAGTCACAGGAGGGAGAGAGAGGCAGTGTACTTGCCCCCATCTCCTGGAGGGAGGTGCGTTGGAAATTCTAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:39097698|39097843 hsa-miR-134-5p 0 0 1
chr3:39097698|39097843 hsa-miR-134-3p 0 0 1
chr3:39097698|39097843 hsa-miR-383-5p 0 0 1
chr3:39097698|39097843 hsa-miR-383-3p 0 0 1
chr3:39097698|39097843 hsa-miR-665 0 1 1
chr3:39097698|39097843 hsa-miR-1179 0 0 1
chr3:39097698|39097843 hsa-miR-1197 0 1 1
chr3:39097698|39097843 hsa-miR-661 1 0 0
chr3:39097698|39097843 hsa-miR-3137 1 1 0
chr3:39097698|39097843 hsa-miR-4280 0 1 0
chr3:39097698|39097843 hsa-miR-4469 0 1 0
chr3:39097698|39097843 hsa-miR-6076 0 1 0
chr3:39097698|39097843 hsa-miR-6078 1 0 0
chr3:39097698|39097843 hsa-miR-8089 1 1 0
chr3:39097698|39097843 hsa-miR-4433a-3p 1 0 0
chr3:39097698|39097843 hsa-miR-6873-3p 0 1 0
chr3:39097698|39097843 hsa-miR-7110-3p 0 1 0
chr3:39097698|39097843 hsa-miR-7845-5p 0 1 0
chr3:39097698|39097843 hsa-miR-6845-3p 1 1 0
chr3:39097698|39097843 hsa-miR-6821-5p 1 0 0
chr3:39097698|39097843 hsa-miR-6810-5p 1 1 0
chr3:39097698|39097843 hsa-miR-6882-3p 1 1 0
chr3:39097698|39097843 hsa-miR-7111-3p 1 1 0
chr3:39097698|39097843 hsa-miR-660-3p 1 1 0
chr3:39097698|39097843 hsa-miR-6867-3p 0 1 0
chr3:39097698|39097843 hsa-miR-6513-3p 0 1 0
chr3:39097698|39097843 hsa-miR-6886-3p 1 0 0
chr3:39097698|39097843 hsa-miR-6760-3p 0 1 0
chr3:39097698|39097843 hsa-miR-130b-5p 0 1 0
chr3:39097698|39097843 hsa-miR-6890-3p 0 1 0
chr3:39097698|39097843 hsa-miR-6743-5p 1 1 0
chr3:39097698|39097843 hsa-miR-7107-5p 1 0 0
chr3:39097698|39097843 hsa-miR-642b-3p 0 1 0
chr3:39097698|39097843 hsa-miR-4697-5p 1 0 0
chr3:39097698|39097843 hsa-miR-4700-5p 0 1 0
chr3:39097698|39097843 hsa-miR-4723-3p 0 1 0
chr3:39097698|39097843 hsa-miR-6769b-3p 0 1 0
chr3:39097698|39097843 hsa-miR-6744-3p 1 1 0
chr3:39097698|39097843 hsa-miR-642a-3p 0 1 0
chr3:39097698|39097843 hsa-miR-523-3p 0 1 0
chr3:39097698|39097843 hsa-miR-521 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:39097698|39097843
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MLHLAQADHHASHRREREAVYLPPSPGGRCVGNSR
Nucleotide Sequence ATGCTACACTTGGCTCAGGCTGATCACCATGCTAGTCACAGGAGGGAGAGAGAGGCAGTGTACTTGCCCCCATCTCCTGGAGGGAGGTGCGTTGGAAATTCTAGG

CircID chr3:39097698|39097843
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence LSPLSCVLVPRLQCYTWLRLITMLVTGGRERQCTCPHLLEGGALEILG
Nucleotide Sequence CTGAGTCCTCTGTCATGTGTCCTTGTCCCTAGGCTACAATGCTACACTTGGCTCAGGCTGATCACCATGCTAGTCACAGGAGGGAGAGAGAGGCAGTGTACTTGCCCCCATCTCCTGGAGGGAGGTGCGTTGGAAATTCTAGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites