CircNet

General Information

circRNA Basic Information

CircID	chr3:40462026\|40462173
Strand	+
CircType	exon
Host Gene	ENSG00000188846.12;
Algorism	CIRI2;
Sequence	CCTTCTGAGCTTTTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGATCTTTTTTGCTGGAACTTTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:40462026\|40462173	hsa-miR-503-5p	0	0	1
chr3:40462026\|40462173	hsa-miR-503-3p	0	0	1
chr3:40462026\|40462173	hsa-miR-545-5p	0	0	1
chr3:40462026\|40462173	hsa-miR-545-3p	0	0	1
chr3:40462026\|40462173	hsa-miR-561-5p	0	0	1
chr3:40462026\|40462173	hsa-miR-561-3p	0	0	1
chr3:40462026\|40462173	hsa-miR-766-5p	0	0	1
chr3:40462026\|40462173	hsa-miR-766-3p	0	0	1
chr3:40462026\|40462173	hsa-miR-548p	0	0	1
chr3:40462026\|40462173	hsa-miR-338-3p	0	0	1
chr3:40462026\|40462173	hsa-miR-346	1	0	0
chr3:40462026\|40462173	hsa-miR-614	1	0	0
chr3:40462026\|40462173	hsa-miR-1469	1	0	0
chr3:40462026\|40462173	hsa-miR-3974	1	0	0
chr3:40462026\|40462173	hsa-miR-5685	0	1	0
chr3:40462026\|40462173	hsa-miR-197-3p	1	0	0
chr3:40462026\|40462173	hsa-miR-1972	0	1	0
chr3:40462026\|40462173	hsa-miR-6720-5p	1	1	0
chr3:40462026\|40462173	hsa-miR-593-5p	1	0	0
chr3:40462026\|40462173	hsa-miR-4763-5p	1	0	0
chr3:40462026\|40462173	hsa-miR-2277-3p	1	0	0
chr3:40462026\|40462173	hsa-miR-4640-5p	1	1	0
chr3:40462026\|40462173	hsa-miR-1266-3p	1	0	0
chr3:40462026\|40462173	hsa-miR-5587-5p	1	0	0
chr3:40462026\|40462173	hsa-miR-6529-5p	1	0	0
chr3:40462026\|40462173	hsa-miR-4690-3p	0	1	0
chr3:40462026\|40462173	hsa-miR-9902	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:40462026\|40462173
ORF Type	ORF1
Protein Length	26
Nucleotide Length	81
Protein Sequence	MEQALLSGLWLSGQEPSGLEPFYSRR
Nucleotide Sequence	TTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGA

CircID	chr3:40462026\|40462173
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MSFWSRRCFLACGFLGRNLLGWSLFTRGGDLFCWNFSSSSSSSSSSST
Nucleotide Sequence	CTGAGCTTTTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGATCTTTTTTGCTGGAACTTTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACC

CircID	chr3:40462026\|40462173
ORF Type	ORF3
Protein Length	48
Nucleotide Length	144
Protein Sequence	MLLLLLLLLLLKFQQKRSPPRVKRLQPRRFLPRKPQARKQRLLQKLRR
Nucleotide Sequence	CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAAGTTCCAGCAAAAAAGATCACCGCCGCGAGTAAAAAGGCTCCAGCCCAGAAGGTTCCTGCCCAGAAAGCCACAGGCCAGAAAGCAGCGCCTGCTCCAAAAGCTCAGAAGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information