CircNet

General Information

circRNA Basic Information

CircID	chr3:40462080\|40462257
Strand	+
CircType	exon
Host Gene	ENSG00000188846.12;
Algorism	CIRI2;
Sequence	CTTTATTACTTTTTATGATTGCCACTTATGCTTTCTTGCCAGATGCCTTTGGAGCAGGTGCTTTCTGGGCTGGAGCTTTTTGACCCTTCTGAGCTTTTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:40462080\|40462257	hsa-miR-31-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-31-3p	0	0	1
chr3:40462080\|40462257	hsa-miR-503-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-503-3p	0	0	1
chr3:40462080\|40462257	hsa-miR-559	0	0	1
chr3:40462080\|40462257	hsa-miR-766-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-766-3p	0	0	1
chr3:40462080\|40462257	hsa-miR-548j-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-548j-3p	0	0	1
chr3:40462080\|40462257	hsa-miR-548n	0	0	1
chr3:40462080\|40462257	hsa-miR-548b-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-548d-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-548c-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-548a-5p	0	0	1
chr3:40462080\|40462257	hsa-miR-548i	0	0	1
chr3:40462080\|40462257	hsa-miR-548h	0	0	1
chr3:40462080\|40462257	hsa-miR-346	1	0	0
chr3:40462080\|40462257	hsa-miR-1469	1	0	0
chr3:40462080\|40462257	hsa-miR-5685	0	1	0
chr3:40462080\|40462257	hsa-miR-6075	1	0	0
chr3:40462080\|40462257	hsa-miR-7706	1	0	0
chr3:40462080\|40462257	hsa-miR-127-5p	1	0	0
chr3:40462080\|40462257	hsa-miR-1972	1	1	0
chr3:40462080\|40462257	hsa-miR-6720-5p	1	1	0
chr3:40462080\|40462257	hsa-miR-6854-5p	0	1	0
chr3:40462080\|40462257	hsa-miR-593-5p	1	0	0
chr3:40462080\|40462257	hsa-miR-4711-5p	1	0	0
chr3:40462080\|40462257	hsa-miR-3934-3p	1	0	0
chr3:40462080\|40462257	hsa-miR-4640-5p	1	1	0
chr3:40462080\|40462257	hsa-miR-3202	0	1	0
chr3:40462080\|40462257	hsa-miR-3160-3p	1	0	0
chr3:40462080\|40462257	hsa-miR-5000-5p	0	1	0
chr3:40462080\|40462257	hsa-miR-519d-5p	0	1	0
chr3:40462080\|40462257	hsa-miR-6738-5p	0	1	0
chr3:40462080\|40462257	hsa-miR-3928-5p	1	0	0
chr3:40462080\|40462257	hsa-miR-6512-3p	0	1	0
chr3:40462080\|40462257	hsa-miR-4690-3p	0	1	0
chr3:40462080\|40462257	hsa-miR-9902	0	1	0
chr3:40462080\|40462257	hsa-miR-498-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:40462080\|40462257
ORF Type	ORF1
Protein Length	52
Nucleotide Length	159
Protein Sequence	MPLMLSCQMPLEQVLSGLELFDPSELLEQALLSGLWLSGQEPSGLEPFYSRR
Nucleotide Sequence	TTGCCACTTATGCTTTCTTGCCAGATGCCTTTGGAGCAGGTGCTTTCTGGGCTGGAGCTTTTTGACCCTTCTGAGCTTTTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGA

CircID	chr3:40462080\|40462257
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MGWSFLTLLSFWSRRCFLACGFLGRNLLGWSLFTRGGD
Nucleotide Sequence	CTGGGCTGGAGCTTTTTGACCCTTCTGAGCTTTTGGAGCAGGCGCTGCTTTCTGGCCTGTGGCTTTCTGGGCAGGAACCTTCTGGGCTGGAGCCTTTTTACTCGCGGCGGTGAT

CircID	chr3:40462080\|40462257
ORF Type	ORF3
Protein Length	41
Nucleotide Length	126
Protein Sequence	MPRKPQARKQRLLQKLRRVKKLQPRKHLLQRHLARKHKWQS
Nucleotide Sequence	CTGCCCAGAAAGCCACAGGCCAGAAAGCAGCGCCTGCTCCAAAAGCTCAGAAGGGTCAAAAAGCTCCAGCCCAGAAAGCACCTGCTCCAAAGGCATCTGGCAAGAAAGCATAAGTGGCAATCATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information