CircNet

General Information

circRNA Basic Information

CircID	chr3:42783441\|42783715
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTCGCCTTTACTAAAAACACAAAAATTAGCCCGACATGGTGGCGCATGCCTGTAATCCCAGCTACTCGGAAGGTTGAAGCATCAGAATCGCACGAAGCTAGGAGGTGGAGGGTGCCGTGAGCTCAGATCACACCACTGTACTCCAGCCTCAGCAACAGAGCAAGACTCTGTCTCAAAATAAACAAACAAACAAACAAACAAACAGTATAAGAGTAAAATCCAATAATATATCGACCAGAACTGGTTAGTAGAGGAGGAGGGAAGGAAGAAATATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:42783441\|42783715	hsa-miR-431-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-431-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-452-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-452-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-517-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-517a-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-517c-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-599	0	0	1
chr3:42783441\|42783715	hsa-miR-656-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-656-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-924	0	1	1
chr3:42783441\|42783715	hsa-miR-1290	0	0	1
chr3:42783441\|42783715	hsa-miR-1267	0	0	1
chr3:42783441\|42783715	hsa-miR-485-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-628-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-876-5p	0	0	1
chr3:42783441\|42783715	hsa-miR-590-3p	0	0	1
chr3:42783441\|42783715	hsa-miR-642	0	0	1
chr3:42783441\|42783715	hsa-miR-638	1	0	0
chr3:42783441\|42783715	hsa-miR-1303	1	1	0
chr3:42783441\|42783715	hsa-miR-3147	1	0	0
chr3:42783441\|42783715	hsa-miR-4430	0	1	0
chr3:42783441\|42783715	hsa-miR-4454	1	0	0
chr3:42783441\|42783715	hsa-miR-3135b	1	1	0
chr3:42783441\|42783715	hsa-miR-4479	1	0	0
chr3:42783441\|42783715	hsa-miR-4656	1	0	0
chr3:42783441\|42783715	hsa-miR-5193	0	1	0
chr3:42783441\|42783715	hsa-miR-6089	1	0	0
chr3:42783441\|42783715	hsa-miR-7160-5p	0	1	0
chr3:42783441\|42783715	hsa-miR-6875-3p	1	1	0
chr3:42783441\|42783715	hsa-miR-4761-3p	1	0	0
chr3:42783441\|42783715	hsa-miR-5585-3p	1	0	0
chr3:42783441\|42783715	hsa-miR-6830-3p	1	0	0
chr3:42783441\|42783715	hsa-miR-4787-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-4667-3p	0	1	0
chr3:42783441\|42783715	hsa-miR-937-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-4750-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-6865-3p	0	1	0
chr3:42783441\|42783715	hsa-miR-4524a-3p	0	1	0
chr3:42783441\|42783715	hsa-miR-3670	0	1	0
chr3:42783441\|42783715	hsa-miR-6734-3p	1	1	0
chr3:42783441\|42783715	hsa-miR-4787-3p	0	1	0
chr3:42783441\|42783715	hsa-miR-5007-5p	0	1	0
chr3:42783441\|42783715	hsa-miR-6752-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-320a-5p	0	1	0
chr3:42783441\|42783715	hsa-miR-10392-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-4726-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-6848-5p	1	0	0
chr3:42783441\|42783715	hsa-miR-6884-5p	0	1	0
chr3:42783441\|42783715	hsa-miR-619-5p	1	1	0
chr3:42783441\|42783715	hsa-miR-4661-5p	0	1	0
chr3:42783441\|42783715	hsa-miR-3913-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:42783441\|42783715
ORF Type	ORF1
Protein Length	35
Nucleotide Length	108
Protein Sequence	MKHQNRTKLGGGGCRELRSHHCTPASATEQDSVSK
Nucleotide Sequence	TTGAAGCATCAGAATCGCACGAAGCTAGGAGGTGGAGGGTGCCGTGAGCTCAGATCACACCACTGTACTCCAGCCTCAGCAACAGAGCAAGACTCTGTCTCAAAATAA

CircID	chr3:42783441\|42783715
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MSQNKQTNKQTNSIRVKSNNISTRTG
Nucleotide Sequence	CTGTCTCAAAATAAACAAACAAACAAACAAACAAACAGTATAAGAGTAAAATCCAATAATATATCGACCAGAACTGGTTAG

CircID	chr3:42783441\|42783715
ORF Type	ORF3
Protein Length	39
Nucleotide Length	120
Protein Sequence	MFVCLFVYFETESCSVAEAGVQWCDLSSRHPPPPSFVRF
Nucleotide Sequence	TTGTTTGTTTGTTTGTTTGTTTATTTTGAGACAGAGTCTTGCTCTGTTGCTGAGGCTGGAGTACAGTGGTGTGATCTGAGCTCACGGCACCCTCCACCTCCTAGCTTCGTGCGATTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information