CircNet

General Information

circRNA Basic Information

CircID	chr3:43349795\|43349960
Strand	-
CircType	exon
Host Gene	ENSG00000163788.12;
Algorism	CIRI2;
Sequence	TGTATATTGCAAATTGCTGATTATGGAAGGGGCCAGTTGCTGTTTTTTCATGCAGTGCCCTGGGAGTCTTAAAAGCAGTGCTTAGCAACATTGGTGATAGCATGTGGCTGGGACCCAGGGCCCTTCCCCACTCTTCAGCCCCGAGTCATGTGTCTGAGGTGACGGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr3:43349795\|43349960	hsa-miR-208a-5p	0	1
chr3:43349795\|43349960	hsa-miR-208a-3p	0	1
chr3:43349795\|43349960	hsa-miR-217-5p	0	1
chr3:43349795\|43349960	hsa-miR-217-3p	0	1
chr3:43349795\|43349960	hsa-miR-193b-5p	0	1
chr3:43349795\|43349960	hsa-miR-193b-3p	0	1
chr3:43349795\|43349960	hsa-miR-545-5p	0	1
chr3:43349795\|43349960	hsa-miR-545-3p	0	1
chr3:43349795\|43349960	hsa-miR-587	0	1
chr3:43349795\|43349960	hsa-miR-208b-5p	0	1
chr3:43349795\|43349960	hsa-miR-208b-3p	0	1
chr3:43349795\|43349960	hsa-miR-1291	0	1
chr3:43349795\|43349960	hsa-miR-1324	0	1
chr3:43349795\|43349960	hsa-miR-491-5p	0	1
chr3:43349795\|43349960	hsa-miR-409-3p	0	1
chr3:43349795\|43349960	hsa-miR-193a-3p	0	1
chr3:43349795\|43349960	hsa-miR-450b-5p	0	1
chr3:43349795\|43349960	hsa-miR-499-5p	0	1
chr3:43349795\|43349960	hsa-miR-637	1	0
chr3:43349795\|43349960	hsa-miR-762	1	0
chr3:43349795\|43349960	hsa-miR-760	1	0
chr3:43349795\|43349960	hsa-miR-4269	1	0
chr3:43349795\|43349960	hsa-miR-4449	1	0
chr3:43349795\|43349960	hsa-miR-5090	1	0
chr3:43349795\|43349960	hsa-miR-5705	1	0
chr3:43349795\|43349960	hsa-miR-5787	1	0
chr3:43349795\|43349960	hsa-miR-6727-5p	1	0
chr3:43349795\|43349960	hsa-miR-6768-5p	1	0
chr3:43349795\|43349960	hsa-miR-6765-3p	1	0
chr3:43349795\|43349960	hsa-miR-6784-5p	1	0
chr3:43349795\|43349960	hsa-miR-4717-3p	1	0
chr3:43349795\|43349960	hsa-miR-6749-5p	1	0
chr3:43349795\|43349960	hsa-miR-744-5p	1	0
chr3:43349795\|43349960	hsa-miR-6775-5p	1	0
chr3:43349795\|43349960	hsa-miR-6803-5p	1	0
chr3:43349795\|43349960	hsa-miR-6813-5p	1	0
chr3:43349795\|43349960	hsa-miR-642b-3p	1	0
chr3:43349795\|43349960	hsa-miR-6846-5p	1	0
chr3:43349795\|43349960	hsa-miR-6848-5p	1	0
chr3:43349795\|43349960	hsa-miR-1266-5p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:43349795\|43349960
ORF Type	ORF1
Protein Length	35
Nucleotide Length	105
Protein Sequence	MGVLKAVLSNIGDSMWLGPRALPHSSAPSHVSEVT
Nucleotide Sequence	CTGGGAGTCTTAAAAGCAGTGCTTAGCAACATTGGTGATAGCATGTGGCTGGGACCCAGGGCCCTTCCCCACTCTTCAGCCCCGAGTCATGTGTCTGAGGTGACG

CircID	chr3:43349795\|43349960
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MGPSHMLSPMLLSTAFKTPRALHEKTATGPFHNQQFAIY
Nucleotide Sequence	CTGGGTCCCAGCCACATGCTATCACCAATGTTGCTAAGCACTGCTTTTAAGACTCCCAGGGCACTGCATGAAAAAACAGCAACTGGCCCCTTCCATAATCAGCAATTTGCAATATAC

CircID	chr3:43349795\|43349960
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MLLRLPGHCMKKQQLAPSIISNLQYT
Nucleotide Sequence	CTGCTTTTAAGACTCCCAGGGCACTGCATGAAAAAACAGCAACTGGCCCCTTCCATAATCAGCAATTTGCAATATACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information