CircRNA Information

General Information
circRNA Basic Information
CircID chr3:45026323|45026416
Strand +
CircType exon
Host Gene ENSG00000163815.5;
Algorism CIRI2;
Sequence CTGGGTCAGGAGGGAGAAGAGGCAGAGGAGGAGGTAGGCCCCCCAGAGCTCCATGCTGCTGCGCGGGCGGGGGCTGCTGCTGCCTGCAGCGGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:45026323|45026416 hsa-miR-15a-5p 0 0 1
chr3:45026323|45026416 hsa-miR-15a-3p 0 0 1
chr3:45026323|45026416 hsa-miR-107 0 0 1
chr3:45026323|45026416 hsa-miR-15b-5p 0 0 1
chr3:45026323|45026416 hsa-miR-15b-3p 0 0 1
chr3:45026323|45026416 hsa-miR-195-5p 0 0 1
chr3:45026323|45026416 hsa-miR-195-3p 0 0 1
chr3:45026323|45026416 hsa-miR-326 1 1 1
chr3:45026323|45026416 hsa-miR-424-5p 0 0 1
chr3:45026323|45026416 hsa-miR-424-3p 0 0 1
chr3:45026323|45026416 hsa-miR-497-5p 0 0 1
chr3:45026323|45026416 hsa-miR-497-3p 0 0 1
chr3:45026323|45026416 hsa-miR-637 1 1 1
chr3:45026323|45026416 hsa-miR-942-5p 0 0 1
chr3:45026323|45026416 hsa-miR-942-3p 0 0 1
chr3:45026323|45026416 hsa-miR-1205 0 0 1
chr3:45026323|45026416 hsa-miR-330-5p 0 1 1
chr3:45026323|45026416 hsa-miR-103 0 0 1
chr3:45026323|45026416 hsa-miR-16 0 0 1
chr3:45026323|45026416 hsa-miR-596 1 0 0
chr3:45026323|45026416 hsa-miR-940 1 0 0
chr3:45026323|45026416 hsa-miR-1281 1 0 0
chr3:45026323|45026416 hsa-miR-1470 1 0 0
chr3:45026323|45026416 hsa-miR-1471 1 0 0
chr3:45026323|45026416 hsa-miR-1913 1 0 0
chr3:45026323|45026416 hsa-miR-1976 1 0 0
chr3:45026323|45026416 hsa-miR-4326 1 0 0
chr3:45026323|45026416 hsa-miR-4268 1 0 0
chr3:45026323|45026416 hsa-miR-4279 1 0 0
chr3:45026323|45026416 hsa-miR-3714 0 1 0
chr3:45026323|45026416 hsa-miR-5193 1 1 0
chr3:45026323|45026416 hsa-miR-6749-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6747-3p 1 1 0
chr3:45026323|45026416 hsa-miR-6836-3p 1 0 0
chr3:45026323|45026416 hsa-miR-149-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6881-3p 1 0 0
chr3:45026323|45026416 hsa-miR-1915-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6845-3p 1 0 0
chr3:45026323|45026416 hsa-miR-877-3p 1 1 0
chr3:45026323|45026416 hsa-miR-6728-3p 1 1 0
chr3:45026323|45026416 hsa-miR-6882-3p 1 1 0
chr3:45026323|45026416 hsa-miR-4436b-5p 1 0 0
chr3:45026323|45026416 hsa-miR-4763-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6894-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6514-3p 1 0 0
chr3:45026323|45026416 hsa-miR-5001-3p 1 1 0
chr3:45026323|45026416 hsa-miR-3191-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6878-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6818-3p 1 1 0
chr3:45026323|45026416 hsa-miR-6809-3p 1 0 0
chr3:45026323|45026416 hsa-miR-7111-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6780a-3p 1 1 0
chr3:45026323|45026416 hsa-miR-4667-3p 0 1 0
chr3:45026323|45026416 hsa-miR-378a-5p 0 1 0
chr3:45026323|45026416 hsa-miR-1237-3p 1 0 0
chr3:45026323|45026416 hsa-miR-1236-3p 1 1 0
chr3:45026323|45026416 hsa-miR-1238-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6867-3p 0 1 0
chr3:45026323|45026416 hsa-miR-1224-3p 1 0 0
chr3:45026323|45026416 hsa-miR-501-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6826-3p 1 0 0
chr3:45026323|45026416 hsa-miR-1914-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6773-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6738-3p 1 0 0
chr3:45026323|45026416 hsa-miR-937-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6880-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6734-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6800-3p 1 0 0
chr3:45026323|45026416 hsa-miR-3162-3p 0 1 0
chr3:45026323|45026416 hsa-miR-3127-3p 1 0 0
chr3:45026323|45026416 hsa-miR-320a-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6754-3p 1 0 0
chr3:45026323|45026416 hsa-miR-328-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6885-5p 1 0 0
chr3:45026323|45026416 hsa-miR-6511b-5p 0 1 0
chr3:45026323|45026416 hsa-miR-6791-3p 1 0 0
chr3:45026323|45026416 hsa-miR-2682-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6727-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6756-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6792-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6801-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6805-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6829-3p 1 1 0
chr3:45026323|45026416 hsa-miR-4723-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6529-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6891-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6744-3p 1 0 0
chr3:45026323|45026416 hsa-miR-10394-5p 0 1 0
chr3:45026323|45026416 hsa-miR-6781-3p 1 1 0
chr3:45026323|45026416 hsa-miR-6827-3p 1 0 0
chr3:45026323|45026416 hsa-miR-6838-5p 0 1 0
chr3:45026323|45026416 hsa-miR-6737-3p 1 0 0
chr3:45026323|45026416 hsa-miR-4524a-5p 0 1 0
chr3:45026323|45026416 hsa-miR-3121-5p 0 1 0
chr3:45026323|45026416 hsa-miR-3927-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr3:45026323|45026416
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence LGQEGEEAEEEVGPPELHAAARAGAAAACSG
Nucleotide Sequence CTGGGTCAGGAGGGAGAAGAGGCAGAGGAGGAGGTAGGCCCCCCAGAGCTCCATGCTGCTGCGCGGGCGGGGGCTGCTGCTGCCTGCAGCGGG
CircID chr3:45026323|45026416
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MQAAAAPARAAAWSSGGPTSSSASSPS
Nucleotide Sequence CTGCAGGCAGCAGCAGCCCCCGCCCGCGCAGCAGCATGGAGCTCTGGGGGGCCTACCTCCTCCTCTGCCTCTTCTCCCTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab