CircRNA Information

General Information
circRNA Basic Information
CircID chr3:47000028|47000112
Strand -
CircType exon
Host Gene ENSG00000160796.15;
Algorism CIRI2;
Sequence CTACCTCCCCCAAGCCAGCCCCACCCAAGCCACCCACTGAGTCACCTGCTGAGCCTTCAGATGTCTTCCTGCCCTCAGAGGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:47000028|47000112 hsa-let-7b-5p 0 0 1
chr3:47000028|47000112 hsa-let-7b-3p 0 0 1
chr3:47000028|47000112 hsa-let-7c-5p 0 0 1
chr3:47000028|47000112 hsa-let-7c-3p 0 0 1
chr3:47000028|47000112 hsa-let-7d-5p 0 0 1
chr3:47000028|47000112 hsa-let-7d-3p 0 0 1
chr3:47000028|47000112 hsa-let-7e-5p 0 0 1
chr3:47000028|47000112 hsa-let-7e-3p 0 0 1
chr3:47000028|47000112 hsa-miR-98-5p 0 0 1
chr3:47000028|47000112 hsa-miR-98-3p 0 0 1
chr3:47000028|47000112 hsa-miR-214-5p 0 0 1
chr3:47000028|47000112 hsa-miR-214-3p 0 0 1
chr3:47000028|47000112 hsa-let-7g-5p 0 0 1
chr3:47000028|47000112 hsa-let-7g-3p 0 0 1
chr3:47000028|47000112 hsa-let-7i-5p 0 0 1
chr3:47000028|47000112 hsa-let-7i-3p 0 0 1
chr3:47000028|47000112 hsa-miR-625-5p 0 0 1
chr3:47000028|47000112 hsa-miR-625-3p 0 0 1
chr3:47000028|47000112 hsa-miR-641 0 0 1
chr3:47000028|47000112 hsa-miR-922 0 0 1
chr3:47000028|47000112 hsa-miR-1293 1 0 1
chr3:47000028|47000112 hsa-miR-1262 0 0 1
chr3:47000028|47000112 hsa-miR-1275 0 0 1
chr3:47000028|47000112 hsa-miR-125a-3p 1 1 1
chr3:47000028|47000112 hsa-miR-7 0 0 1
chr3:47000028|47000112 hsa-let-7a 0 0 1
chr3:47000028|47000112 hsa-let-7f 0 0 1
chr3:47000028|47000112 hsa-miR-24 0 0 1
chr3:47000028|47000112 hsa-miR-637 1 0 0
chr3:47000028|47000112 hsa-miR-661 1 0 0
chr3:47000028|47000112 hsa-miR-663a 1 0 0
chr3:47000028|47000112 hsa-miR-1294 1 0 0
chr3:47000028|47000112 hsa-miR-2861 1 0 0
chr3:47000028|47000112 hsa-miR-3141 1 0 0
chr3:47000028|47000112 hsa-miR-3164 1 0 0
chr3:47000028|47000112 hsa-miR-4322 1 0 0
chr3:47000028|47000112 hsa-miR-4270 1 0 0
chr3:47000028|47000112 hsa-miR-3665 1 0 0
chr3:47000028|47000112 hsa-miR-4489 1 0 0
chr3:47000028|47000112 hsa-miR-4498 0 1 0
chr3:47000028|47000112 hsa-miR-4506 1 0 0
chr3:47000028|47000112 hsa-miR-4507 1 0 0
chr3:47000028|47000112 hsa-miR-4508 1 0 0
chr3:47000028|47000112 hsa-miR-1587 1 0 0
chr3:47000028|47000112 hsa-miR-4648 1 0 0
chr3:47000028|47000112 hsa-miR-4651 1 0 0
chr3:47000028|47000112 hsa-miR-4688 1 0 0
chr3:47000028|47000112 hsa-miR-4721 1 1 0
chr3:47000028|47000112 hsa-miR-4736 1 0 0
chr3:47000028|47000112 hsa-miR-4748 1 0 0
chr3:47000028|47000112 hsa-miR-5191 1 0 0
chr3:47000028|47000112 hsa-miR-5194 1 0 0
chr3:47000028|47000112 hsa-miR-5572 1 0 0
chr3:47000028|47000112 hsa-miR-5787 1 0 0
chr3:47000028|47000112 hsa-miR-6069 1 0 0
chr3:47000028|47000112 hsa-miR-6085 1 0 0
chr3:47000028|47000112 hsa-miR-6125 1 0 0
chr3:47000028|47000112 hsa-miR-6126 0 1 0
chr3:47000028|47000112 hsa-miR-6745 1 0 0
chr3:47000028|47000112 hsa-miR-7704 1 0 0
chr3:47000028|47000112 hsa-miR-8089 1 0 0
chr3:47000028|47000112 hsa-miR-12119 1 1 0
chr3:47000028|47000112 hsa-miR-134-5p 1 0 0
chr3:47000028|47000112 hsa-miR-510-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6799-5p 1 0 0
chr3:47000028|47000112 hsa-miR-1227-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6089 1 0 0
chr3:47000028|47000112 hsa-miR-6744-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4722-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6741-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6727-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4474-3p 1 0 0
chr3:47000028|47000112 hsa-miR-3622b-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6759-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6721-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6742-5p 1 0 0
chr3:47000028|47000112 hsa-miR-491-5p 1 0 0
chr3:47000028|47000112 hsa-miR-3151-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6748-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6793-5p 1 0 0
chr3:47000028|47000112 hsa-miR-185-3p 1 1 0
chr3:47000028|47000112 hsa-miR-6829-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6732-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6810-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6786-5p 1 0 0
chr3:47000028|47000112 hsa-miR-5088-5p 1 0 0
chr3:47000028|47000112 hsa-miR-7109-5p 1 0 0
chr3:47000028|47000112 hsa-miR-1226-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6740-5p 1 0 0
chr3:47000028|47000112 hsa-miR-3944-3p 1 0 0
chr3:47000028|47000112 hsa-miR-1229-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4640-5p 1 0 0
chr3:47000028|47000112 hsa-miR-1228-5p 1 0 0
chr3:47000028|47000112 hsa-miR-296-3p 1 0 0
chr3:47000028|47000112 hsa-miR-4690-5p 1 0 0
chr3:47000028|47000112 hsa-miR-7854-3p 1 0 0
chr3:47000028|47000112 hsa-miR-4446-3p 1 0 0
chr3:47000028|47000112 hsa-miR-937-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6800-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6802-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6886-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6781-5p 1 0 0
chr3:47000028|47000112 hsa-miR-194-3p 1 0 0
chr3:47000028|47000112 hsa-miR-3189-3p 1 0 0
chr3:47000028|47000112 hsa-miR-4727-3p 1 0 0
chr3:47000028|47000112 hsa-miR-744-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6792-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4797-3p 1 0 0
chr3:47000028|47000112 hsa-miR-1207-5p 1 0 0
chr3:47000028|47000112 hsa-miR-1233-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4763-3p 1 0 0
chr3:47000028|47000112 hsa-miR-6769b-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6778-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6893-5p 1 0 0
chr3:47000028|47000112 hsa-miR-5001-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6737-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6743-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6754-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6756-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6769a-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6803-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6813-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6819-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6842-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6751-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6779-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6780a-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6797-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6879-5p 1 1 0
chr3:47000028|47000112 hsa-miR-7111-5p 1 1 0
chr3:47000028|47000112 hsa-miR-3620-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4728-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6780b-5p 1 0 0
chr3:47000028|47000112 hsa-miR-10396a-5p 1 0 0
chr3:47000028|47000112 hsa-miR-10396b-5p 1 0 0
chr3:47000028|47000112 hsa-miR-328-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4632-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4701-3p 1 0 0
chr3:47000028|47000112 hsa-miR-4745-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6735-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6846-5p 1 1 0
chr3:47000028|47000112 hsa-miR-6848-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4436b-3p 1 1 0
chr3:47000028|47000112 hsa-miR-4758-5p 1 0 0
chr3:47000028|47000112 hsa-miR-365a-5p 1 0 0
chr3:47000028|47000112 hsa-miR-3940-5p 1 0 0
chr3:47000028|47000112 hsa-miR-7843-5p 0 1 0
chr3:47000028|47000112 hsa-miR-6736-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6855-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6766-5p 1 0 0
chr3:47000028|47000112 hsa-miR-4757-5p 1 0 0
chr3:47000028|47000112 hsa-miR-6884-5p 1 0 0
chr3:47000028|47000112 hsa-miR-3619-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:47000028|47000112
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRAGRHLKAQQVTQWVAWVGLAWGR
Nucleotide Sequence CTGAGGGCAGGAAGACATCTGAAGGCTCAGCAGGTGACTCAGTGGGTGGCTTGGGTGGGGCTGGCTTGGGGGAGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab