CircNet

General Information

circRNA Basic Information

CircID	chr3:47062163\|47064630
Strand	-
CircType	exon
Host Gene	ENSG00000181555.19;
Algorism	CIRI2;find_circ;CIRC
Sequence	GAAATCAGCCTGAATAAATGGAATGACTTGTCTGCCTCACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGGAAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:47062163\|47064630	hsa-miR-197-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:47062163\|47064630
ORF Type	ORF1
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLLASEIKHLPRRLLIGQERETQTSKLKIKRKGNEEAPSHHPLLPMSGEQKGQMT
Nucleotide Sequence	ATGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGGAAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:47062163\|47064630	U2AF2	13	13	4
chr3:47062163\|47064630	ELAVL1	4	7	1
chr3:47062163\|47064630	ELAVL3	0	1	0
chr3:47062163\|47064630	TBRG4	0	2	0
chr3:47062163\|47064630	CELF2	0	1	0
chr3:47062163\|47064630	PRPF8	0	1	0
chr3:47062163\|47064630	YTHDF1	0	1	0
chr3:47062163\|47064630	UPF1	1	0	0
chr3:47062163\|47064630	FMR1	0	1	2
chr3:47062163\|47064630	NUDT21	0	1	1
chr3:47062163\|47064630	GPKOW	1	2	1
chr3:47062163\|47064630	FUS	1	2	0
chr3:47062163\|47064630	DGCR8	0	1	0
chr3:47062163\|47064630	SRSF7	0	1	1
chr3:47062163\|47064630	CPSF4	0	1	0
chr3:47062163\|47064630	SRSF1	0	2	0
chr3:47062163\|47064630	NOP58	2	1	1
chr3:47062163\|47064630	U2AF1	2	0	2
chr3:47062163\|47064630	ADAR	1	0	0
chr3:47062163\|47064630	KHSRP	0	2	1
chr3:47062163\|47064630	NOP56	1	0	1
chr3:47062163\|47064630	DDX54	0	1	6
chr3:47062163\|47064630	HNRNPL	1	0	0
chr3:47062163\|47064630	FIP1L1	0	1	0
chr3:47062163\|47064630	PTBP1	0	1	0
chr3:47062163\|47064630	HNRNPC	25	38	4
chr3:47062163\|47064630	HNRNPD	0	1	0
chr3:47062163\|47064630	DHX9	0	1	1
chr3:47062163\|47064630	DDX3X	0	2	0
chr3:47062163\|47064630	TIAL1	0	1	0
chr3:47062163\|47064630	HNRNPA1	4	3	0
chr3:47062163\|47064630	QKI	0	1	0
chr3:47062163\|47064630	SND1	0	0	1
chr3:47062163\|47064630	IGF2BP1	0	0	1
chr3:47062163\|47064630	IGF2BP3	0	0	2
chr3:47062163\|47064630	IGF2BP2	1	1	5
chr3:47062163\|47064630	TARDBP	0	4	5
chr3:47062163\|47064630	YTHDC1	0	0	1
chr3:47062163\|47064630	RBFOX2	0	2	0
chr3:47062163\|47064630	DDX24	1	0	0
chr3:47062163\|47064630	RBM47	1	0	0
chr3:47062163\|47064630	CSTF2T	0	1	1
chr3:47062163\|47064630	CSTF2	1	4	0
chr3:47062163\|47064630	CPSF7	0	1	0
chr3:47062163\|47064630	WDR33	1	1	0
chr3:47062163\|47064630	PPIG	1	0	0
chr3:47062163\|47064630	EIF4A3	4	4	2
chr3:47062163\|47064630	FBL	2	0	1

CircRNA Information