CircNet

General Information

circRNA Basic Information

CircID	chr3:47120816\|47120980
Strand	+
CircType	exon
Host Gene	ENSG00000181555.18;
Algorism	CIRI2;
Sequence	AGACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGAAAAACAGAATTGAGTTTTTCTTCCTCTTGTGAGATACCACATGTGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTACCACGTATCAGCAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr3:47120816\|47120980	hsa-miR-130a-5p	0	1
chr3:47120816\|47120980	hsa-miR-130a-3p	0	1
chr3:47120816\|47120980	hsa-miR-301a-5p	0	1
chr3:47120816\|47120980	hsa-miR-301a-3p	0	1
chr3:47120816\|47120980	hsa-miR-130b-5p	0	1
chr3:47120816\|47120980	hsa-miR-130b-3p	0	1
chr3:47120816\|47120980	hsa-miR-379-5p	0	1
chr3:47120816\|47120980	hsa-miR-379-3p	0	1
chr3:47120816\|47120980	hsa-miR-526b-5p	0	1
chr3:47120816\|47120980	hsa-miR-526b-3p	0	1
chr3:47120816\|47120980	hsa-miR-578	0	1
chr3:47120816\|47120980	hsa-miR-454-5p	0	1
chr3:47120816\|47120980	hsa-miR-454-3p	0	1
chr3:47120816\|47120980	hsa-miR-301b-5p	0	1
chr3:47120816\|47120980	hsa-miR-301b-3p	0	1
chr3:47120816\|47120980	hsa-miR-934	0	1
chr3:47120816\|47120980	hsa-miR-513b-5p	0	1
chr3:47120816\|47120980	hsa-miR-513b-3p	0	1
chr3:47120816\|47120980	hsa-miR-628-5p	0	1
chr3:47120816\|47120980	hsa-miR-342-3p	0	1
chr3:47120816\|47120980	hsa-miR-1238-5p	1	0
chr3:47120816\|47120980	hsa-miR-7107-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:47120816\|47120980
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MGKTELSFSSSCEIPHVDGLHSSEELRNLGWDFSQEKPSTTYQQ
Nucleotide Sequence	CTGGGAAAAACAGAATTGAGTTTTTCTTCCTCTTGTGAGATACCACATGTGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTACCACGTATCAGCAA

CircID	chr3:47120816\|47120980
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MMSASHPHVVSHKRKKNSILFFPVYYLACFGKWS
Nucleotide Sequence	CTGATGAGTGCAAGCCATCCACATGTGGTATCTCACAAGAGGAAGAAAAACTCAATTCTGTTTTTCCCAGTCTACTATCTGGCCTGTTTTGGAAAGTGGTCT

CircID	chr3:47120816\|47120980
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MWYLTRGRKTQFCFSQSTIWPVLESG
Nucleotide Sequence	ATGTGGTATCTCACAAGAGGAAGAAAAACTCAATTCTGTTTTTCCCAGTCTACTATCTGGCCTGTTTTGGAAAGTGGT

CircID	chr3:47120816\|47120980
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MSSSDECKPSTCGISQEEEKLNSVFPSLLSGLFWKVV
Nucleotide Sequence	CTGAGCTCTTCTGATGAGTGCAAGCCATCCACATGTGGTATCTCACAAGAGGAAGAAAAACTCAATTCTGTTTTTCCCAGTCTACTATCTGGCCTGTTTTGGAAAGTGGTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information