CircNet

General Information

circRNA Basic Information

CircID	chr3:48562444\|48562618
Strand	-
CircType	exon
Host Gene	ENSG00000145040.3;
Algorism	CIRI2;
Sequence	TCGCCACAGCAGTGACCTTACGTGGCAGCATCCAAGCTGTCCGGACATATATTAGGTCTGTGGGGCACACAGGCATGGCAAGACTCCATGTGGCAGTGACCCAACTTAGCAATGTCCAATGTCCAGGCTGTCCAGACACACTGTGACTCTGTGGGGCACTCAGATCTGATATGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr3:48562444\|48562618	hsa-miR-27a-5p	0	1
chr3:48562444\|48562618	hsa-miR-27a-3p	0	1
chr3:48562444\|48562618	hsa-miR-27b-5p	0	1
chr3:48562444\|48562618	hsa-miR-27b-3p	0	1
chr3:48562444\|48562618	hsa-miR-382-5p	0	1
chr3:48562444\|48562618	hsa-miR-382-3p	0	1
chr3:48562444\|48562618	hsa-miR-422a	0	1
chr3:48562444\|48562618	hsa-miR-431-5p	0	1
chr3:48562444\|48562618	hsa-miR-431-3p	0	1
chr3:48562444\|48562618	hsa-miR-924	0	1
chr3:48562444\|48562618	hsa-miR-1231	0	1
chr3:48562444\|48562618	hsa-miR-361-5p	0	1
chr3:48562444\|48562618	hsa-miR-1289	0	1
chr3:48562444\|48562618	hsa-miR-128	0	1
chr3:48562444\|48562618	hsa-miR-378	0	1
chr3:48562444\|48562618	hsa-miR-1254	0	1
chr3:48562444\|48562618	hsa-miR-3651	1	0
chr3:48562444\|48562618	hsa-miR-6860	1	0
chr3:48562444\|48562618	hsa-miR-6857-5p	1	0
chr3:48562444\|48562618	hsa-miR-3189-5p	1	0
chr3:48562444\|48562618	hsa-miR-4717-3p	1	0
chr3:48562444\|48562618	hsa-miR-6890-3p	1	0
chr3:48562444\|48562618	hsa-miR-4632-5p	1	0
chr3:48562444\|48562618	hsa-miR-3187-5p	1	0
chr3:48562444\|48562618	hsa-miR-10398-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:48562444\|48562618
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MSAPQSHSVSGQPGHWTLLSWVTATWSLAMPVCPTDLIYVRTAWMLPRKVTAVA
Nucleotide Sequence	CTGAGTGCCCCACAGAGTCACAGTGTGTCTGGACAGCCTGGACATTGGACATTGCTAAGTTGGGTCACTGCCACATGGAGTCTTGCCATGCCTGTGTGCCCCACAGACCTAATATATGTCCGGACAGCTTGGATGCTGCCACGTAAGGTCACTGCTGTGGCG

CircID	chr3:48562444\|48562618
ORF Type	ORF2
Protein Length	33
Nucleotide Length	102
Protein Sequence	MDIAKLGHCHMESCHACVPHRPNICPDSLDAAT
Nucleotide Sequence	TTGGACATTGCTAAGTTGGGTCACTGCCACATGGAGTCTTGCCATGCCTGTGTGCCCCACAGACCTAATATATGTCCGGACAGCTTGGATGCTGCCACGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information