CircRNA Information

General Information
circRNA Basic Information
CircID chr3:48681577|48681716
Strand +
CircType exon
Host Gene ENSG00000213672.6;
Algorism CIRI2;
Sequence CTCCCTGGACACGCTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCCAGCTGCTCACCCACACCCCCACCTGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAAGGCATCAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:48681577|48681716 hsa-miR-198 0 0 1
chr3:48681577|48681716 hsa-miR-422a 1 0 1
chr3:48681577|48681716 hsa-miR-432-5p 0 0 1
chr3:48681577|48681716 hsa-miR-432-3p 0 0 1
chr3:48681577|48681716 hsa-miR-552-5p 0 0 1
chr3:48681577|48681716 hsa-miR-552-3p 0 0 1
chr3:48681577|48681716 hsa-miR-646 0 0 1
chr3:48681577|48681716 hsa-miR-744-5p 0 0 1
chr3:48681577|48681716 hsa-miR-744-3p 0 0 1
chr3:48681577|48681716 hsa-miR-1262 0 0 1
chr3:48681577|48681716 hsa-miR-1307-5p 0 0 1
chr3:48681577|48681716 hsa-miR-1307-3p 0 0 1
chr3:48681577|48681716 hsa-miR-1321 0 0 1
chr3:48681577|48681716 hsa-miR-532-5p 0 0 1
chr3:48681577|48681716 hsa-miR-1207-3p 0 0 1
chr3:48681577|48681716 hsa-miR-1302 0 0 1
chr3:48681577|48681716 hsa-miR-378 0 0 1
chr3:48681577|48681716 hsa-miR-768-5p 0 0 1
chr3:48681577|48681716 hsa-miR-663 0 0 1
chr3:48681577|48681716 hsa-miR-608 1 0 0
chr3:48681577|48681716 hsa-miR-663a 1 0 0
chr3:48681577|48681716 hsa-miR-762 1 0 0
chr3:48681577|48681716 hsa-miR-1268a 1 0 0
chr3:48681577|48681716 hsa-miR-1275 1 0 0
chr3:48681577|48681716 hsa-miR-2861 1 0 0
chr3:48681577|48681716 hsa-miR-3132 1 0 0
chr3:48681577|48681716 hsa-miR-378b 1 0 0
chr3:48681577|48681716 hsa-miR-3137 1 0 0
chr3:48681577|48681716 hsa-miR-3147 1 0 0
chr3:48681577|48681716 hsa-miR-3188 1 0 0
chr3:48681577|48681716 hsa-miR-3196 1 0 0
chr3:48681577|48681716 hsa-miR-378c 1 0 0
chr3:48681577|48681716 hsa-miR-4298 1 0 0
chr3:48681577|48681716 hsa-miR-4300 1 0 0
chr3:48681577|48681716 hsa-miR-4260 1 0 0
chr3:48681577|48681716 hsa-miR-3652 1 0 0
chr3:48681577|48681716 hsa-miR-3661 1 0 0
chr3:48681577|48681716 hsa-miR-3945 1 0 0
chr3:48681577|48681716 hsa-miR-1268b 1 0 0
chr3:48681577|48681716 hsa-miR-378e 1 0 0
chr3:48681577|48681716 hsa-miR-378f 1 0 0
chr3:48681577|48681716 hsa-miR-378g 1 0 0
chr3:48681577|48681716 hsa-miR-4430 1 0 0
chr3:48681577|48681716 hsa-miR-378h 1 0 0
chr3:48681577|48681716 hsa-miR-3135b 1 0 0
chr3:48681577|48681716 hsa-miR-4462 1 0 0
chr3:48681577|48681716 hsa-miR-4466 1 0 0
chr3:48681577|48681716 hsa-miR-4488 1 0 0
chr3:48681577|48681716 hsa-miR-4492 1 0 0
chr3:48681577|48681716 hsa-miR-4498 1 0 0
chr3:48681577|48681716 hsa-miR-4505 1 0 0
chr3:48681577|48681716 hsa-miR-4507 1 0 0
chr3:48681577|48681716 hsa-miR-4508 1 0 0
chr3:48681577|48681716 hsa-miR-4515 1 0 0
chr3:48681577|48681716 hsa-miR-4533 1 0 0
chr3:48681577|48681716 hsa-miR-1587 1 0 0
chr3:48681577|48681716 hsa-miR-4538 1 0 0
chr3:48681577|48681716 hsa-miR-4651 1 0 0
chr3:48681577|48681716 hsa-miR-4656 1 0 0
chr3:48681577|48681716 hsa-miR-4674 1 0 0
chr3:48681577|48681716 hsa-miR-4675 1 0 0
chr3:48681577|48681716 hsa-miR-4706 1 0 0
chr3:48681577|48681716 hsa-miR-4739 1 0 0
chr3:48681577|48681716 hsa-miR-4741 1 0 0
chr3:48681577|48681716 hsa-miR-5090 1 0 0
chr3:48681577|48681716 hsa-miR-5194 1 0 0
chr3:48681577|48681716 hsa-miR-5572 1 0 0
chr3:48681577|48681716 hsa-miR-5787 1 0 0
chr3:48681577|48681716 hsa-miR-6085 1 0 0
chr3:48681577|48681716 hsa-miR-6127 1 0 0
chr3:48681577|48681716 hsa-miR-6129 1 0 0
chr3:48681577|48681716 hsa-miR-6133 1 0 0
chr3:48681577|48681716 hsa-miR-8072 1 0 0
chr3:48681577|48681716 hsa-miR-8089 1 0 0
chr3:48681577|48681716 hsa-miR-12114 1 0 0
chr3:48681577|48681716 hsa-miR-150-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6734-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6747-5p 1 0 0
chr3:48681577|48681716 hsa-miR-7106-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6799-5p 1 0 0
chr3:48681577|48681716 hsa-miR-8071 1 0 0
chr3:48681577|48681716 hsa-miR-3622a-5p 1 0 0
chr3:48681577|48681716 hsa-miR-7851-3p 1 0 0
chr3:48681577|48681716 hsa-miR-7114-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6515-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6880-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6741-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6727-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3622b-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6759-5p 1 0 0
chr3:48681577|48681716 hsa-miR-197-5p 1 0 0
chr3:48681577|48681716 hsa-miR-874-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6776-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6742-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3151-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6748-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6772-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6793-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6796-5p 1 0 0
chr3:48681577|48681716 hsa-miR-185-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6829-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6732-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6805-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6782-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3934-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6786-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6835-5p 1 0 0
chr3:48681577|48681716 hsa-miR-7109-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1229-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1908-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1228-5p 1 0 0
chr3:48681577|48681716 hsa-miR-296-3p 1 0 0
chr3:48681577|48681716 hsa-miR-92b-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6749-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4787-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4446-3p 1 0 0
chr3:48681577|48681716 hsa-miR-149-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6781-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3189-3p 1 0 0
chr3:48681577|48681716 hsa-miR-4707-5p 1 0 0
chr3:48681577|48681716 hsa-miR-654-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6499-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1233-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4763-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6769b-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6787-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6812-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6816-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6870-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6775-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1343-5p 1 0 0
chr3:48681577|48681716 hsa-miR-5001-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6726-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6752-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6754-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6756-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6769a-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6803-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6813-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6851-5p 1 0 0
chr3:48681577|48681716 hsa-miR-7110-5p 1 0 0
chr3:48681577|48681716 hsa-miR-10401-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1249-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6722-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6751-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6779-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6780a-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6797-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6808-5p 1 0 0
chr3:48681577|48681716 hsa-miR-7111-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3620-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4728-5p 1 0 0
chr3:48681577|48681716 hsa-miR-5189-5p 1 0 0
chr3:48681577|48681716 hsa-miR-5196-5p 1 0 0
chr3:48681577|48681716 hsa-miR-10396a-5p 1 0 0
chr3:48681577|48681716 hsa-miR-10396b-5p 1 0 0
chr3:48681577|48681716 hsa-miR-1237-5p 1 0 0
chr3:48681577|48681716 hsa-miR-328-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4632-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4649-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4749-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6729-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6794-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6795-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6846-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6848-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6883-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6887-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4697-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6885-5p 1 0 0
chr3:48681577|48681716 hsa-miR-939-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4758-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3085-5p 1 0 0
chr3:48681577|48681716 hsa-miR-3940-5p 1 0 0
chr3:48681577|48681716 hsa-miR-4665-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6891-5p 1 0 0
chr3:48681577|48681716 hsa-miR-378a-3p 1 0 0
chr3:48681577|48681716 hsa-miR-4716-3p 1 0 0
chr3:48681577|48681716 hsa-miR-6785-5p 1 0 0
chr3:48681577|48681716 hsa-miR-6791-5p 1 0 0
chr3:48681577|48681716 hsa-miR-33b-3p 1 0 0
chr3:48681577|48681716 hsa-miR-378d 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:48681577|48681716
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MLTHTPTCAPPRHPHHRVPSPAPSLQGIS
Nucleotide Sequence CTGCTCACCCACACCCCCACCTGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAAGGCATCAGC
CircID chr3:48681577|48681716
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MDTLYTSSSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPSKASA
Nucleotide Sequence CTGGACACGCTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCCAGCTGCTCACCCACACCCCCACCTGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAAGGCATCAGCA
CircID chr3:48681577|48681716
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MNQAPAAHPHPHLCPAEAPTPPCPKSSPLPPRHQH
Nucleotide Sequence CTGAACCAGGCTCCAGCTGCTCACCCACACCCCCACCTGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAAGGCATCAGCAC
CircID chr3:48681577|48681716
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MMPWREGAGLGTRWCGCLGGAQVGVWVSSWSLVQMGWSWYRACPG
Nucleotide Sequence CTGATGCCTTGGAGGGAGGGGGCTGGACTTGGGACACGGTGGTGTGGGTGCCTCGGCGGGGCACAGGTGGGGGTGTGGGTGAGCAGCTGGAGCCTGGTTCAGATGGGCTGGAGCTGGTATAGAGCGTGTCCAGGG
CircID chr3:48681577|48681716
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MEGGGWTWDTVVWVPRRGTGGGVGEQLEPGSDGLELV
Nucleotide Sequence TTGGAGGGAGGGGGCTGGACTTGGGACACGGTGGTGTGGGTGCCTCGGCGGGGCACAGGTGGGGGTGTGGGTGAGCAGCTGGAGCCTGGTTCAGATGGGCTGGAGCTGGTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab