CircRNA Information

General Information
circRNA Basic Information
CircID chr3:49014895|49015158
Strand -
CircType exon
Host Gene ENSG00000178252.16;
Algorism CIRI2;
Sequence CCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTGGAGATGCTACAGCTAGAAGAGGCTGTGGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:49014895|49015158 hsa-miR-107 0 1 1
chr3:49014895|49015158 hsa-miR-197-5p 0 0 1
chr3:49014895|49015158 hsa-miR-197-3p 0 0 1
chr3:49014895|49015158 hsa-miR-150-5p 0 0 1
chr3:49014895|49015158 hsa-miR-150-3p 0 0 1
chr3:49014895|49015158 hsa-miR-328-5p 0 0 1
chr3:49014895|49015158 hsa-miR-328-3p 0 0 1
chr3:49014895|49015158 hsa-miR-412-5p 0 0 1
chr3:49014895|49015158 hsa-miR-412-3p 0 0 1
chr3:49014895|49015158 hsa-miR-493-5p 0 0 1
chr3:49014895|49015158 hsa-miR-493-3p 0 0 1
chr3:49014895|49015158 hsa-miR-496 0 0 1
chr3:49014895|49015158 hsa-miR-193b-5p 0 0 1
chr3:49014895|49015158 hsa-miR-193b-3p 0 0 1
chr3:49014895|49015158 hsa-miR-526b-5p 0 0 1
chr3:49014895|49015158 hsa-miR-526b-3p 0 0 1
chr3:49014895|49015158 hsa-miR-588 0 0 1
chr3:49014895|49015158 hsa-miR-591 0 0 1
chr3:49014895|49015158 hsa-miR-634 0 0 1
chr3:49014895|49015158 hsa-miR-635 0 0 1
chr3:49014895|49015158 hsa-miR-641 0 0 1
chr3:49014895|49015158 hsa-miR-650 0 0 1
chr3:49014895|49015158 hsa-miR-651-5p 0 0 1
chr3:49014895|49015158 hsa-miR-651-3p 0 0 1
chr3:49014895|49015158 hsa-miR-663b 0 0 1
chr3:49014895|49015158 hsa-miR-1291 0 0 1
chr3:49014895|49015158 hsa-miR-1304-5p 0 0 1
chr3:49014895|49015158 hsa-miR-1304-3p 0 0 1
chr3:49014895|49015158 hsa-miR-1251-5p 0 0 1
chr3:49014895|49015158 hsa-miR-1251-3p 0 0 1
chr3:49014895|49015158 hsa-miR-1322 0 0 1
chr3:49014895|49015158 hsa-miR-769-5p 0 0 1
chr3:49014895|49015158 hsa-miR-532-3p 0 1 1
chr3:49014895|49015158 hsa-miR-485-5p 1 1 1
chr3:49014895|49015158 hsa-miR-1207-3p 0 0 1
chr3:49014895|49015158 hsa-miR-188-3p 0 0 1
chr3:49014895|49015158 hsa-miR-193a-3p 0 0 1
chr3:49014895|49015158 hsa-miR-103 0 0 1
chr3:49014895|49015158 hsa-miR-220c 0 0 1
chr3:49014895|49015158 hsa-miR-1826 0 0 1
chr3:49014895|49015158 hsa-miR-638 1 0 0
chr3:49014895|49015158 hsa-miR-3183 0 1 0
chr3:49014895|49015158 hsa-miR-3909 0 1 0
chr3:49014895|49015158 hsa-miR-3974 0 1 0
chr3:49014895|49015158 hsa-miR-4656 1 1 0
chr3:49014895|49015158 hsa-miR-5685 0 1 0
chr3:49014895|49015158 hsa-miR-8060 1 0 0
chr3:49014895|49015158 hsa-miR-1843 0 1 0
chr3:49014895|49015158 hsa-miR-4731-5p 0 1 0
chr3:49014895|49015158 hsa-miR-7155-5p 0 1 0
chr3:49014895|49015158 hsa-miR-27a-5p 0 1 0
chr3:49014895|49015158 hsa-miR-4786-5p 0 1 0
chr3:49014895|49015158 hsa-miR-8069 1 0 0
chr3:49014895|49015158 hsa-miR-6849-3p 0 1 0
chr3:49014895|49015158 hsa-miR-6810-5p 1 0 0
chr3:49014895|49015158 hsa-miR-7109-3p 1 0 0
chr3:49014895|49015158 hsa-miR-1226-5p 1 0 0
chr3:49014895|49015158 hsa-miR-4763-5p 1 0 0
chr3:49014895|49015158 hsa-miR-4717-3p 0 1 0
chr3:49014895|49015158 hsa-miR-103a-3p 0 1 0
chr3:49014895|49015158 hsa-miR-3191-3p 1 0 0
chr3:49014895|49015158 hsa-miR-3120-3p 0 1 0
chr3:49014895|49015158 hsa-miR-6872-3p 0 1 0
chr3:49014895|49015158 hsa-miR-6837-3p 0 1 0
chr3:49014895|49015158 hsa-miR-7151-5p 0 1 0
chr3:49014895|49015158 hsa-miR-214-3p 0 1 0
chr3:49014895|49015158 hsa-miR-4802-5p 1 1 0
chr3:49014895|49015158 hsa-miR-6890-3p 0 1 0
chr3:49014895|49015158 hsa-miR-4802-3p 0 1 0
chr3:49014895|49015158 hsa-miR-299-5p 0 1 0
chr3:49014895|49015158 hsa-miR-6722-3p 1 0 0
chr3:49014895|49015158 hsa-miR-6774-5p 0 1 0
chr3:49014895|49015158 hsa-miR-3620-5p 1 0 0
chr3:49014895|49015158 hsa-miR-6848-5p 1 0 0
chr3:49014895|49015158 hsa-miR-3187-5p 0 1 0
chr3:49014895|49015158 hsa-miR-6877-3p 0 1 0
chr3:49014895|49015158 hsa-miR-2682-3p 0 1 0
chr3:49014895|49015158 hsa-miR-10392-3p 1 0 0
chr3:49014895|49015158 hsa-miR-6819-3p 0 1 0
chr3:49014895|49015158 hsa-miR-6884-5p 1 1 0
chr3:49014895|49015158 hsa-miR-6781-3p 1 1 0
chr3:49014895|49015158 hsa-miR-4690-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:49014895|49015158
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MLQLEEAVGEAGLVPQLRVLEEYSVPCAHAAHVTGLKILSPSIMVSASIDQRLTFWRLGHGEP
Nucleotide Sequence ATGCTACAGCTAGAAGAGGCTGTGGGAGAGGCTGGGCTGGTACCCCAGCTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAAGATCCTAAGCCCAAGCATCATGGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACCC
CircID chr3:49014895|49015158
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MEAETMMLGLRILRPVTWAACAQGTEYSSSTRSWGTSPASPTASSSCSISTASTKTWRDPSSLPLATRWWPSR
Nucleotide Sequence ATGGAGGCTGAGACCATGATGCTTGGGCTTAGGATCTTGAGGCCTGTCACATGGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCACAGCCTCTTCTAGCTGTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGGCCACGAGATGGTGGCCCTCACGG
CircID chr3:49014895|49015158
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MSHGQHVHRGQSIPLAHAAGVPAQPLPQPLLAVASPQQARRHGGIHLHCHWPRDGGPH
Nucleotide Sequence CTGTCACATGGGCAGCATGTGCACAGGGGACAGAGTATTCCTCTAGCACACGCAGCTGGGGTACCAGCCCAGCCTCTCCCACAGCCTCTTCTAGCTGTAGCATCTCCACAGCAAGCACGAAGACATGGAGGGATCCATCTTCACTGCCACTGGCCACGAGATGGTGGCCCTCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab