CircRNA Information

General Information
circRNA Basic Information
CircID chr3:49123999|49124249
Strand -
CircType exon
Host Gene ENSG00000172037.12;
Algorism CIRI2;
Sequence ACTGGTCACAGCGCACACCAGACACCCCTGGGCGGCAGCTGCAGTGACCTGTGAAGCGGTGACACTGAGGTGTATCTATTCCACGAGAGTCACAATCACAGGCTGCAAGAAAGAGCAGAGCACAGAGTTAGGGTCACTGTGGGGCATTCTGGGAAGTCCTCCATCTACCCTGGCCCCGCTGGCTCCCTCACCATGGCACTGCAACCCAGGGTCTCCCCAGTGGAGCTCTTGGCACTCAGAACAAGTCCGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:49123999|49124249 hsa-miR-22-5p 0 0 1
chr3:49123999|49124249 hsa-miR-22-3p 0 0 1
chr3:49123999|49124249 hsa-miR-27a-5p 0 0 1
chr3:49123999|49124249 hsa-miR-27a-3p 0 0 1
chr3:49123999|49124249 hsa-miR-27b-5p 0 0 1
chr3:49123999|49124249 hsa-miR-27b-3p 0 0 1
chr3:49123999|49124249 hsa-miR-134-5p 0 0 1
chr3:49123999|49124249 hsa-miR-134-3p 0 0 1
chr3:49123999|49124249 hsa-miR-335-5p 0 0 1
chr3:49123999|49124249 hsa-miR-335-3p 0 0 1
chr3:49123999|49124249 hsa-miR-504-5p 0 0 1
chr3:49123999|49124249 hsa-miR-504-3p 0 0 1
chr3:49123999|49124249 hsa-miR-578 0 0 1
chr3:49123999|49124249 hsa-miR-597-5p 0 0 1
chr3:49123999|49124249 hsa-miR-597-3p 0 0 1
chr3:49123999|49124249 hsa-miR-617 0 1 1
chr3:49123999|49124249 hsa-miR-618 0 0 1
chr3:49123999|49124249 hsa-miR-758-5p 0 0 1
chr3:49123999|49124249 hsa-miR-758-3p 0 0 1
chr3:49123999|49124249 hsa-miR-1301-5p 0 0 1
chr3:49123999|49124249 hsa-miR-1301-3p 0 0 1
chr3:49123999|49124249 hsa-miR-765 0 0 1
chr3:49123999|49124249 hsa-miR-744-5p 0 0 1
chr3:49123999|49124249 hsa-miR-744-3p 0 0 1
chr3:49123999|49124249 hsa-miR-933 0 0 1
chr3:49123999|49124249 hsa-miR-939-5p 0 0 1
chr3:49123999|49124249 hsa-miR-939-3p 0 0 1
chr3:49123999|49124249 hsa-miR-1231 0 0 1
chr3:49123999|49124249 hsa-miR-1184 0 0 1
chr3:49123999|49124249 hsa-miR-767-3p 0 0 1
chr3:49123999|49124249 hsa-miR-513a-5p 0 0 1
chr3:49123999|49124249 hsa-miR-509-3-5p 0 0 1
chr3:49123999|49124249 hsa-miR-509-5p 0 0 1
chr3:49123999|49124249 hsa-miR-508-3p 1 0 1
chr3:49123999|49124249 hsa-miR-128 0 0 1
chr3:49123999|49124249 hsa-miR-220c 0 0 1
chr3:49123999|49124249 hsa-miR-219-5p 0 0 1
chr3:49123999|49124249 hsa-miR-365 0 0 1
chr3:49123999|49124249 hsa-miR-663a 1 0 0
chr3:49123999|49124249 hsa-miR-2113 0 1 0
chr3:49123999|49124249 hsa-miR-3132 1 1 0
chr3:49123999|49124249 hsa-miR-378c 1 0 0
chr3:49123999|49124249 hsa-miR-4466 1 0 0
chr3:49123999|49124249 hsa-miR-4489 1 0 0
chr3:49123999|49124249 hsa-miR-4534 0 1 0
chr3:49123999|49124249 hsa-miR-4689 1 0 0
chr3:49123999|49124249 hsa-miR-4710 0 1 0
chr3:49123999|49124249 hsa-miR-4739 1 0 0
chr3:49123999|49124249 hsa-miR-5047 0 1 0
chr3:49123999|49124249 hsa-miR-6090 1 0 0
chr3:49123999|49124249 hsa-miR-6127 1 1 0
chr3:49123999|49124249 hsa-miR-6133 0 1 0
chr3:49123999|49124249 hsa-miR-8070 0 1 0
chr3:49123999|49124249 hsa-miR-128-3p 0 1 0
chr3:49123999|49124249 hsa-miR-3194-3p 1 1 0
chr3:49123999|49124249 hsa-miR-671-5p 1 0 0
chr3:49123999|49124249 hsa-miR-3150a-3p 1 1 0
chr3:49123999|49124249 hsa-miR-6861-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6825-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6894-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6857-5p 1 0 0
chr3:49123999|49124249 hsa-miR-129-5p 0 1 0
chr3:49123999|49124249 hsa-miR-1227-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6089 1 0 0
chr3:49123999|49124249 hsa-miR-769-5p 1 0 0
chr3:49123999|49124249 hsa-miR-197-5p 1 1 0
chr3:49123999|49124249 hsa-miR-6776-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6827-5p 0 1 0
chr3:49123999|49124249 hsa-miR-4753-3p 0 1 0
chr3:49123999|49124249 hsa-miR-6728-3p 0 1 0
chr3:49123999|49124249 hsa-miR-7855-5p 0 1 0
chr3:49123999|49124249 hsa-miR-5008-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6786-5p 1 0 0
chr3:49123999|49124249 hsa-miR-1226-5p 1 0 0
chr3:49123999|49124249 hsa-miR-1909-5p 0 1 0
chr3:49123999|49124249 hsa-miR-4640-5p 1 1 0
chr3:49123999|49124249 hsa-miR-6753-5p 0 1 0
chr3:49123999|49124249 hsa-miR-885-3p 1 0 0
chr3:49123999|49124249 hsa-miR-6516-5p 0 1 0
chr3:49123999|49124249 hsa-miR-6824-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6802-5p 0 1 0
chr3:49123999|49124249 hsa-miR-6742-3p 0 1 0
chr3:49123999|49124249 hsa-miR-6811-3p 0 1 0
chr3:49123999|49124249 hsa-miR-6828-3p 0 1 0
chr3:49123999|49124249 hsa-miR-4758-3p 0 1 0
chr3:49123999|49124249 hsa-miR-216a-3p 0 1 0
chr3:49123999|49124249 hsa-miR-875-5p 0 1 0
chr3:49123999|49124249 hsa-miR-516a-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6505-5p 0 1 0
chr3:49123999|49124249 hsa-miR-4802-5p 0 1 0
chr3:49123999|49124249 hsa-miR-4679 0 1 0
chr3:49123999|49124249 hsa-miR-3664-5p 0 1 0
chr3:49123999|49124249 hsa-miR-6812-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6870-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6775-5p 1 0 0
chr3:49123999|49124249 hsa-miR-1343-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6756-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6763-5p 0 1 0
chr3:49123999|49124249 hsa-miR-328-5p 1 0 0
chr3:49123999|49124249 hsa-miR-4649-5p 1 0 0
chr3:49123999|49124249 hsa-miR-4726-5p 1 1 0
chr3:49123999|49124249 hsa-miR-6794-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6795-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6887-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6845-5p 0 1 0
chr3:49123999|49124249 hsa-miR-4758-5p 1 0 0
chr3:49123999|49124249 hsa-miR-3085-5p 1 1 0
chr3:49123999|49124249 hsa-miR-6791-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6822-5p 1 0 0
chr3:49123999|49124249 hsa-miR-6805-3p 0 1 0
chr3:49123999|49124249 hsa-miR-6764-5p 0 1 0
chr3:49123999|49124249 hsa-miR-370-5p 0 1 0
chr3:49123999|49124249 hsa-miR-7973 0 1 0
chr3:49123999|49124249 hsa-miR-365a-3p 0 1 0
chr3:49123999|49124249 hsa-miR-365b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:49123999|49124249
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MQERAEHRVRVTVGHSGKSSIYPGPAGSLTMALQPRVSPVELLALRTSP
Nucleotide Sequence CTGCAAGAAAGAGCAGAGCACAGAGTTAGGGTCACTGTGGGGCATTCTGGGAAGTCCTCCATCTACCCTGGCCCCGCTGGCTCCCTCACCATGGCACTGCAACCCAGGGTCTCCCCAGTGGAGCTCTTGGCACTCAGAACAAGTCCG

CircID chr3:49123999|49124249
ORF Type ORF2
Protein Length 83
Nucleotide Length 249
Protein Sequence LVTAHTRHPWAAAAVTCEAVTLRCIYSTRVTITGCKKEQSTELGSLWGILGSPPSTLAPLAPSPWHCNPGSPQWSSWHSEQVR
Nucleotide Sequence CTGGTCACAGCGCACACCAGACACCCCTGGGCGGCAGCTGCAGTGACCTGTGAAGCGGTGACACTGAGGTGTATCTATTCCACGAGAGTCACAATCACAGGCTGCAAGAAAGAGCAGAGCACAGAGTTAGGGTCACTGTGGGGCATTCTGGGAAGTCCTCCATCTACCCTGGCCCCGCTGGCTCCCTCACCATGGCACTGCAACCCAGGGTCTCCCCAGTGGAGCTCTTGGCACTCAGAACAAGTCCGC

CircID chr3:49123999|49124249
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MLFLAACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQ
Nucleotide Sequence CTGCTCTTTCTTGCAGCCTGTGATTGTGACTCTCGTGGAATAGATACACCTCAGTGTCACCGCTTCACAGGTCACTGCAGCTGCCGCCCAGGGGTGTCTGGTGTGCGCTGTGACCAG

CircID chr3:49123999|49124249
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MQCHGEGASGARVDGGLPRMPHSDPNSVLCSFLQPVIVTLVE
Nucleotide Sequence TTGCAGTGCCATGGTGAGGGAGCCAGCGGGGCCAGGGTAGATGGAGGACTTCCCAGAATGCCCCACAGTGACCCTAACTCTGTGCTCTGCTCTTTCTTGCAGCCTGTGATTGTGACTCTCGTGGAATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites