CircRNA Information

General Information
circRNA Basic Information
CircID chr3:49124502|49124884
Strand +
CircType exon
Host Gene ENSG00000172037.12;
Algorism CIRI2;
Sequence CCATCAAGGCCAGGTGGCCGGTGCCAACTGTGTGAGTGCAGTGGGAACATTGACCCAATGGATCCTGATGCCTGTGACCCCCACACGGGGCAATGCCTGCGCTGTTTACACCACACAGAGGGTCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGAGCTGTCACCGTGAGTATGAGTGTGGGAGGGCATGGCTGAATTGGGGTTCTGCTTCTTGGCCTCCTCTTGACTACTGTGCTCATCTTGGTTGGCACAGGCTGCACATGCAACCTGCTGGGCACAAATCCGCAGCAGTGCCCATCTCCTGACCAGTGCCACTGTGATCCAAGCAGTGGGCAGTGCCCATGCCTCCCCAATGTCCAGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:49124502|49124884 hsa-miR-27a-5p 0 0 1
chr3:49124502|49124884 hsa-miR-27a-3p 0 0 1
chr3:49124502|49124884 hsa-miR-30a-5p 0 0 1
chr3:49124502|49124884 hsa-miR-30a-3p 0 0 1
chr3:49124502|49124884 hsa-miR-96-5p 0 0 1
chr3:49124502|49124884 hsa-miR-96-3p 0 0 1
chr3:49124502|49124884 hsa-miR-30d-5p 0 0 1
chr3:49124502|49124884 hsa-miR-30d-3p 0 0 1
chr3:49124502|49124884 hsa-miR-214-5p 0 0 1
chr3:49124502|49124884 hsa-miR-214-3p 0 0 1
chr3:49124502|49124884 hsa-miR-27b-5p 0 0 1
chr3:49124502|49124884 hsa-miR-27b-3p 0 0 1
chr3:49124502|49124884 hsa-miR-30b-5p 0 0 1
chr3:49124502|49124884 hsa-miR-30b-3p 0 0 1
chr3:49124502|49124884 hsa-miR-30e-5p 0 0 1
chr3:49124502|49124884 hsa-miR-30e-3p 0 0 1
chr3:49124502|49124884 hsa-miR-377-5p 0 0 1
chr3:49124502|49124884 hsa-miR-377-3p 0 0 1
chr3:49124502|49124884 hsa-miR-335-5p 0 0 1
chr3:49124502|49124884 hsa-miR-335-3p 0 0 1
chr3:49124502|49124884 hsa-miR-596 0 0 1
chr3:49124502|49124884 hsa-miR-650 0 0 1
chr3:49124502|49124884 hsa-miR-657 0 0 1
chr3:49124502|49124884 hsa-miR-1271-5p 0 0 1
chr3:49124502|49124884 hsa-miR-1271-3p 0 0 1
chr3:49124502|49124884 hsa-miR-939-5p 0 0 1
chr3:49124502|49124884 hsa-miR-939-3p 0 0 1
chr3:49124502|49124884 hsa-miR-1227-5p 0 0 1
chr3:49124502|49124884 hsa-miR-1227-3p 0 0 1
chr3:49124502|49124884 hsa-miR-1291 0 0 1
chr3:49124502|49124884 hsa-miR-1256 0 0 1
chr3:49124502|49124884 hsa-miR-671-5p 1 0 1
chr3:49124502|49124884 hsa-miR-491-5p 0 0 1
chr3:49124502|49124884 hsa-miR-532-3p 0 0 1
chr3:49124502|49124884 hsa-miR-188-3p 0 0 1
chr3:49124502|49124884 hsa-miR-513a-5p 0 0 1
chr3:49124502|49124884 hsa-miR-199b-3p 0 0 1
chr3:49124502|49124884 hsa-miR-199a-3p 0 0 1
chr3:49124502|49124884 hsa-miR-342-3p 0 0 1
chr3:49124502|49124884 hsa-miR-542-3p 0 0 1
chr3:49124502|49124884 hsa-miR-1260 0 0 1
chr3:49124502|49124884 hsa-miR-128 0 0 1
chr3:49124502|49124884 hsa-miR-30c 0 0 1
chr3:49124502|49124884 hsa-miR-220c 0 0 1
chr3:49124502|49124884 hsa-miR-644 0 0 1
chr3:49124502|49124884 hsa-miR-147 0 0 1
chr3:49124502|49124884 hsa-miR-564 1 0 0
chr3:49124502|49124884 hsa-miR-612 1 0 0
chr3:49124502|49124884 hsa-miR-638 1 0 0
chr3:49124502|49124884 hsa-miR-661 1 0 0
chr3:49124502|49124884 hsa-miR-378b 1 0 0
chr3:49124502|49124884 hsa-miR-3155a 1 0 0
chr3:49124502|49124884 hsa-miR-4322 1 0 0
chr3:49124502|49124884 hsa-miR-3911 1 0 0
chr3:49124502|49124884 hsa-miR-3155b 1 0 0
chr3:49124502|49124884 hsa-miR-4538 1 0 0
chr3:49124502|49124884 hsa-miR-4642 1 0 0
chr3:49124502|49124884 hsa-miR-1972 1 0 0
chr3:49124502|49124884 hsa-miR-6746-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6806-5p 1 0 0
chr3:49124502|49124884 hsa-miR-3151-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6821-5p 1 0 0
chr3:49124502|49124884 hsa-miR-619-3p 1 0 0
chr3:49124502|49124884 hsa-miR-6771-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6824-5p 1 0 0
chr3:49124502|49124884 hsa-miR-1225-5p 1 0 0
chr3:49124502|49124884 hsa-miR-3944-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6801-5p 1 0 0
chr3:49124502|49124884 hsa-miR-10400-5p 1 0 0
chr3:49124502|49124884 hsa-miR-4763-3p 1 0 0
chr3:49124502|49124884 hsa-miR-6775-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6726-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6752-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6754-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6803-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6851-5p 1 0 0
chr3:49124502|49124884 hsa-miR-10401-5p 1 0 0
chr3:49124502|49124884 hsa-miR-5189-5p 1 0 0
chr3:49124502|49124884 hsa-miR-328-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6885-5p 1 0 0
chr3:49124502|49124884 hsa-miR-541-3p 1 0 0
chr3:49124502|49124884 hsa-miR-6724-5p 1 0 0
chr3:49124502|49124884 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:49124502|49124884
ORF Type ORF1
Protein Length 98
Nucleotide Length 297
Protein Sequence MCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHREYECGRAWLNWGSASWPPLDYCAHLGWHRLHMQPAGHKSAAVPIS
Nucleotide Sequence CTGTGTGAGTGCAGTGGGAACATTGACCCAATGGATCCTGATGCCTGTGACCCCCACACGGGGCAATGCCTGCGCTGTTTACACCACACAGAGGGTCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGAGCTGTCACCGTGAGTATGAGTGTGGGAGGGCATGGCTGAATTGGGGTTCTGCTTCTTGGCCTCCTCTTGACTACTGTGCTCATCTTGGTTGGCACAGGCTGCACATGCAACCTGCTGGGCACAAATCCGCAGCAGTGCCCATCTCCTGA

CircID chr3:49124502|49124884
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MTQWILMPVTPTRGNACAVYTTQRVHTVPTASLASMGRLPDRAVTVSMSVGGHG
Nucleotide Sequence TTGACCCAATGGATCCTGATGCCTGTGACCCCCACACGGGGCAATGCCTGCGCTGTTTACACCACACAGAGGGTCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGAGCTGTCACCGTGAGTATGAGTGTGGGAGGGCATGGCTGA

CircID chr3:49124502|49124884
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MLLGLLLTTVLILVGTGCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQG
Nucleotide Sequence CTGCTTCTTGGCCTCCTCTTGACTACTGTGCTCATCTTGGTTGGCACAGGCTGCACATGCAACCTGCTGGGCACAAATCCGCAGCAGTGCCCATCTCCTGACCAGTGCCACTGTGATCCAAGCAGTGGGCAGTGCCCATGCCTCCCCAATGTCCAGGGC

CircID chr3:49124502|49124884
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MPALFTPHRGSTLCPLQAWLPWAGCPTELSP
Nucleotide Sequence ATGCCTGCGCTGTTTACACCACACAGAGGGTCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGAGCTGTCACCGTGA

CircID chr3:49124502|49124884
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MCSSWLAQAAHATCWAQIRSSAHLLTSATVIQAVGSAHASPMSRA
Nucleotide Sequence CTGTGCTCATCTTGGTTGGCACAGGCTGCACATGCAACCTGCTGGGCACAAATCCGCAGCAGTGCCCATCTCCTGACCAGTGCCACTGTGATCCAAGCAGTGGGCAGTGCCCATGCCTCCCCAATGTCCAGGGCC

CircID chr3:49124502|49124884
ORF Type ORF6
Protein Length 35
Nucleotide Length 108
Protein Sequence MGTAHCLDHSGTGQEMGTAADLCPAGCMCSLCQPR
Nucleotide Sequence ATGGGCACTGCCCACTGCTTGGATCACAGTGGCACTGGTCAGGAGATGGGCACTGCTGCGGATTTGTGCCCAGCAGGTTGCATGTGCAGCCTGTGCCAACCAAGATGA

CircID chr3:49124502|49124884
ORF Type ORF7
Protein Length 47
Nucleotide Length 141
Protein Sequence MQWAQCGPSVWCKQRRHCPVWGSQASGSIGSMFPLHSHSWHRPPGLD
Nucleotide Sequence TTGCAGTGGGCACAGTGTGGACCCTCTGTGTGGTGTAAACAGCGCAGGCATTGCCCCGTGTGGGGGTCACAGGCATCAGGATCCATTGGGTCAATGTTCCCACTGCACTCACACAGTTGGCACCGGCCACCTGGCCTTGAT

CircID chr3:49124502|49124884
ORF Type ORF8
Protein Length 126
Nucleotide Length 378
Protein Sequence MDIGEAWALPTAWITVALVRRWALLRICAQQVACAACANQDEHSSQEEAKKQNPNSAMPSHTHTHGDSSVGQPAHGSQACSGHSVDPLCGVNSAGIAPCGGHRHQDPLGQCSHCTHTVGTGHLALM
Nucleotide Sequence CTGGACATTGGGGAGGCATGGGCACTGCCCACTGCTTGGATCACAGTGGCACTGGTCAGGAGATGGGCACTGCTGCGGATTTGTGCCCAGCAGGTTGCATGTGCAGCCTGTGCCAACCAAGATGAGCACAGTAGTCAAGAGGAGGCCAAGAAGCAGAACCCCAATTCAGCCATGCCCTCCCACACTCATACTCACGGTGACAGCTCTGTCGGGCAGCCTGCCCATGGAAGCCAGGCTTGCAGTGGGCACAGTGTGGACCCTCTGTGTGGTGTAAACAGCGCAGGCATTGCCCCGTGTGGGGGTCACAGGCATCAGGATCCATTGGGTCAATGTTCCCACTGCACTCACACAGTTGGCACCGGCCACCTGGCCTTGATG

CircID chr3:49124502|49124884
ORF Type ORF9
Protein Length 88
Nucleotide Length 267
Protein Sequence MGRHGHCPLLGSQWHWSGDGHCCGFVPSRLHVQPVPTKMSTVVKRRPRSRTPIQPCPPTLILTVTALSGSLPMEARLAVGTVWTLCVV
Nucleotide Sequence TTGGGGAGGCATGGGCACTGCCCACTGCTTGGATCACAGTGGCACTGGTCAGGAGATGGGCACTGCTGCGGATTTGTGCCCAGCAGGTTGCATGTGCAGCCTGTGCCAACCAAGATGAGCACAGTAGTCAAGAGGAGGCCAAGAAGCAGAACCCCAATTCAGCCATGCCCTCCCACACTCATACTCACGGTGACAGCTCTGTCGGGCAGCCTGCCCATGGAAGCCAGGCTTGCAGTGGGCACAGTGTGGACCCTCTGTGTGGTGTAA

CircID chr3:49124502|49124884
ORF Type ORF10
Protein Length 29
Nucleotide Length 90
Protein Sequence MPRVGVTGIRIHWVNVPTALTQLAPATWP
Nucleotide Sequence TTGCCCCGTGTGGGGGTCACAGGCATCAGGATCCATTGGGTCAATGTTCCCACTGCACTCACACAGTTGGCACCGGCCACCTGGCCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites