CircRNA Information

General Information
circRNA Basic Information
CircID chr3:4984298|4984502
Strand +
CircType exon
Host Gene ENSG00000134107.4;
Algorism CIRI2;
Sequence CTTGGTTTGGTTCCCTGCACAGTAAGTACTAATGGTTAGGCCTAGAAACAGGTGCCAGAAGCCCAGGGAACTCCTCCCTCCCTCCGGGGCAGCTCAGCTTGTACAAGGGGCCCATTTTCAGTTCCTTAGTAAGCTAATCACTACGAAAGCCTGAGTAGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:4984298|4984502 hsa-miR-21-5p 0 0 1
chr3:4984298|4984502 hsa-miR-21-3p 0 0 1
chr3:4984298|4984502 hsa-miR-22-5p 0 0 1
chr3:4984298|4984502 hsa-miR-22-3p 0 0 1
chr3:4984298|4984502 hsa-miR-484 0 0 1
chr3:4984298|4984502 hsa-miR-510-5p 0 0 1
chr3:4984298|4984502 hsa-miR-510-3p 0 0 1
chr3:4984298|4984502 hsa-miR-558 0 0 1
chr3:4984298|4984502 hsa-miR-583 0 0 1
chr3:4984298|4984502 hsa-miR-645 0 0 1
chr3:4984298|4984502 hsa-miR-765 0 0 1
chr3:4984298|4984502 hsa-miR-892a 0 0 1
chr3:4984298|4984502 hsa-miR-1276 0 0 1
chr3:4984298|4984502 hsa-miR-1278 0 0 1
chr3:4984298|4984502 hsa-miR-1321 0 0 1
chr3:4984298|4984502 hsa-miR-512-5p 0 0 1
chr3:4984298|4984502 hsa-miR-296-5p 0 0 1
chr3:4984298|4984502 hsa-miR-767-3p 0 0 1
chr3:4984298|4984502 hsa-miR-324-3p 0 0 1
chr3:4984298|4984502 hsa-miR-590-5p 0 0 1
chr3:4984298|4984502 hsa-miR-1274a 0 0 1
chr3:4984298|4984502 hsa-miR-1245 0 0 1
chr3:4984298|4984502 hsa-miR-661 0 1 0
chr3:4984298|4984502 hsa-miR-1260a 0 1 0
chr3:4984298|4984502 hsa-miR-4281 1 0 0
chr3:4984298|4984502 hsa-miR-4510 0 1 0
chr3:4984298|4984502 hsa-miR-4663 0 1 0
chr3:4984298|4984502 hsa-miR-4739 1 1 0
chr3:4984298|4984502 hsa-miR-6090 1 0 0
chr3:4984298|4984502 hsa-miR-6127 0 1 0
chr3:4984298|4984502 hsa-miR-6129 0 1 0
chr3:4984298|4984502 hsa-miR-6133 1 1 0
chr3:4984298|4984502 hsa-miR-8052 1 0 0
chr3:4984298|4984502 hsa-miR-12120 1 1 0
chr3:4984298|4984502 hsa-miR-6749-3p 1 0 0
chr3:4984298|4984502 hsa-miR-7106-5p 1 0 0
chr3:4984298|4984502 hsa-miR-874-3p 0 1 0
chr3:4984298|4984502 hsa-miR-3189-5p 1 0 0
chr3:4984298|4984502 hsa-miR-1915-5p 1 0 0
chr3:4984298|4984502 hsa-miR-6782-5p 1 0 0
chr3:4984298|4984502 hsa-miR-939-3p 0 1 0
chr3:4984298|4984502 hsa-miR-7109-5p 1 0 0
chr3:4984298|4984502 hsa-miR-149-3p 1 1 0
chr3:4984298|4984502 hsa-miR-3925-5p 1 0 0
chr3:4984298|4984502 hsa-miR-7106-3p 1 1 0
chr3:4984298|4984502 hsa-miR-6828-3p 0 1 0
chr3:4984298|4984502 hsa-miR-1249-5p 1 1 0
chr3:4984298|4984502 hsa-miR-6779-5p 1 0 0
chr3:4984298|4984502 hsa-miR-6797-5p 0 1 0
chr3:4984298|4984502 hsa-miR-3620-5p 1 0 0
chr3:4984298|4984502 hsa-miR-4728-5p 0 1 0
chr3:4984298|4984502 hsa-miR-328-5p 1 0 0
chr3:4984298|4984502 hsa-miR-6883-5p 0 1 0
chr3:4984298|4984502 hsa-miR-10398-3p 0 1 0
chr3:4984298|4984502 hsa-miR-6750-5p 1 0 0
chr3:4984298|4984502 hsa-miR-6724-5p 1 0 0
chr3:4984298|4984502 hsa-miR-6822-5p 0 1 0
chr3:4984298|4984502 hsa-miR-10400-3p 1 0 0
chr3:4984298|4984502 hsa-miR-10392-3p 1 0 0
chr3:4984298|4984502 hsa-miR-4756-5p 0 1 0
chr3:4984298|4984502 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:4984298|4984502
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MVRPRNRCQKPRELLPPSGAAQLVQGAHFQFLSKLITTKA
Nucleotide Sequence ATGGTTAGGCCTAGAAACAGGTGCCAGAAGCCCAGGGAACTCCTCCCTCCCTCCGGGGCAGCTCAGCTTGTACAAGGGGCCCATTTTCAGTTCCTTAGTAAGCTAATCACTACGAAAGCCTGA

CircID chr3:4984298|4984502
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MKMGPLYKLSCPGGREEFPGLLAPVSRPNH
Nucleotide Sequence CTGAAAATGGGCCCCTTGTACAAGCTGAGCTGCCCCGGAGGGAGGGAGGAGTTCCCTGGGCTTCTGGCACCTGTTTCTAGGCCTAACCATTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites