CircRNA Information

General Information
circRNA Basic Information
CircID chr3:50252100|50252448
Strand +
CircType exon
Host Gene ENSG00000114353.15;
Algorism CIRI2;
Sequence CGCCCGGTACTGCCGGCATTCCTCCTCGGAGTAGCCATCCTCGTGGATGATCCTGATAGCCAGGGACCAGGAAGGTTAGTGTCCCCTGGGCACTGGGAGTTCCCACGGCTGCCTGGGGCTACTGGGACCTGCTTCAGAGAAGGGAAAACTGCCCCTGACCCACTGGGACCTGAGGGTCCTTCTGCTTCTCAGAAGATTCTGGGCCTGGCTAAGACTGGCTGGGCCTGTAGTCGGGGGCAGTGCAGGCCCAGAGGGTGAAGAGGGGAAGCTGGAGTTTGAGCACTGCCTCTGGAATACAGCACTTACTTCATCTGCTTGACGATGGTGCTCTTCCCTGACTCCCCAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:50252100|50252448 hsa-miR-29a-5p 0 0 1
chr3:50252100|50252448 hsa-miR-29a-3p 0 0 1
chr3:50252100|50252448 hsa-miR-34a-5p 0 0 1
chr3:50252100|50252448 hsa-miR-34a-3p 0 0 1
chr3:50252100|50252448 hsa-miR-204-5p 0 0 1
chr3:50252100|50252448 hsa-miR-204-3p 0 0 1
chr3:50252100|50252448 hsa-miR-211-5p 0 0 1
chr3:50252100|50252448 hsa-miR-211-3p 0 0 1
chr3:50252100|50252448 hsa-miR-29c-5p 0 0 1
chr3:50252100|50252448 hsa-miR-29c-3p 0 0 1
chr3:50252100|50252448 hsa-miR-302a-5p 0 0 1
chr3:50252100|50252448 hsa-miR-302a-3p 0 0 1
chr3:50252100|50252448 hsa-miR-302b-5p 0 0 1
chr3:50252100|50252448 hsa-miR-302b-3p 0 0 1
chr3:50252100|50252448 hsa-miR-302c-5p 0 0 1
chr3:50252100|50252448 hsa-miR-302c-3p 0 0 1
chr3:50252100|50252448 hsa-miR-302d-5p 0 0 1
chr3:50252100|50252448 hsa-miR-302d-3p 0 0 1
chr3:50252100|50252448 hsa-miR-372-5p 0 0 1
chr3:50252100|50252448 hsa-miR-372-3p 0 0 1
chr3:50252100|50252448 hsa-miR-373-5p 0 0 1
chr3:50252100|50252448 hsa-miR-373-3p 0 0 1
chr3:50252100|50252448 hsa-miR-326 0 1 1
chr3:50252100|50252448 hsa-miR-449a 0 0 1
chr3:50252100|50252448 hsa-miR-412-5p 0 0 1
chr3:50252100|50252448 hsa-miR-412-3p 0 0 1
chr3:50252100|50252448 hsa-miR-520e-5p 0 0 1
chr3:50252100|50252448 hsa-miR-520e-3p 0 0 1
chr3:50252100|50252448 hsa-miR-520b-5p 0 0 1
chr3:50252100|50252448 hsa-miR-520b-3p 0 0 1
chr3:50252100|50252448 hsa-miR-575 0 1 1
chr3:50252100|50252448 hsa-miR-612 0 0 1
chr3:50252100|50252448 hsa-miR-623 0 0 1
chr3:50252100|50252448 hsa-miR-630 0 0 1
chr3:50252100|50252448 hsa-miR-449b-5p 0 0 1
chr3:50252100|50252448 hsa-miR-449b-3p 0 0 1
chr3:50252100|50252448 hsa-miR-766-5p 0 0 1
chr3:50252100|50252448 hsa-miR-766-3p 0 0 1
chr3:50252100|50252448 hsa-miR-298 1 0 1
chr3:50252100|50252448 hsa-miR-939-5p 0 0 1
chr3:50252100|50252448 hsa-miR-939-3p 0 0 1
chr3:50252100|50252448 hsa-miR-942-5p 0 0 1
chr3:50252100|50252448 hsa-miR-942-3p 0 0 1
chr3:50252100|50252448 hsa-miR-1253 0 0 1
chr3:50252100|50252448 hsa-miR-302e 0 0 1
chr3:50252100|50252448 hsa-miR-1292-5p 0 0 1
chr3:50252100|50252448 hsa-miR-1292-3p 0 0 1
chr3:50252100|50252448 hsa-miR-1825 0 1 1
chr3:50252100|50252448 hsa-miR-1827 0 0 1
chr3:50252100|50252448 hsa-miR-512-3p 0 1 1
chr3:50252100|50252448 hsa-miR-486-3p 1 0 1
chr3:50252100|50252448 hsa-miR-767-5p 0 1 1
chr3:50252100|50252448 hsa-miR-525-5p 0 1 1
chr3:50252100|50252448 hsa-miR-508-5p 0 0 1
chr3:50252100|50252448 hsa-miR-324-3p 0 0 1
chr3:50252100|50252448 hsa-miR-520a-5p 0 1 1
chr3:50252100|50252448 hsa-miR-330-5p 0 1 1
chr3:50252100|50252448 hsa-miR-520d-3p 0 0 1
chr3:50252100|50252448 hsa-miR-34c-5p 0 0 1
chr3:50252100|50252448 hsa-miR-519b-3p 0 0 1
chr3:50252100|50252448 hsa-miR-519c-3p 0 0 1
chr3:50252100|50252448 hsa-miR-520a-3p 0 0 1
chr3:50252100|50252448 hsa-miR-520c-3p 0 1 1
chr3:50252100|50252448 hsa-miR-151-5p 0 0 1
chr3:50252100|50252448 hsa-miR-371-5p 0 0 1
chr3:50252100|50252448 hsa-miR-1300 0 0 1
chr3:50252100|50252448 hsa-miR-1285 0 0 1
chr3:50252100|50252448 hsa-miR-29b 0 0 1
chr3:50252100|50252448 hsa-miR-519a 0 0 1
chr3:50252100|50252448 hsa-miR-618 0 1 0
chr3:50252100|50252448 hsa-miR-4323 0 1 0
chr3:50252100|50252448 hsa-miR-4251 0 1 0
chr3:50252100|50252448 hsa-miR-3937 0 1 0
chr3:50252100|50252448 hsa-miR-4514 0 1 0
chr3:50252100|50252448 hsa-miR-4518 0 1 0
chr3:50252100|50252448 hsa-miR-4673 0 1 0
chr3:50252100|50252448 hsa-miR-4688 1 0 0
chr3:50252100|50252448 hsa-miR-4692 0 1 0
chr3:50252100|50252448 hsa-miR-4706 1 0 0
chr3:50252100|50252448 hsa-miR-4741 1 0 0
chr3:50252100|50252448 hsa-miR-4751 0 1 0
chr3:50252100|50252448 hsa-miR-4794 0 1 0
chr3:50252100|50252448 hsa-miR-5787 1 0 0
chr3:50252100|50252448 hsa-miR-6081 1 0 0
chr3:50252100|50252448 hsa-miR-8089 1 1 0
chr3:50252100|50252448 hsa-miR-9900 0 1 0
chr3:50252100|50252448 hsa-miR-12119 1 0 0
chr3:50252100|50252448 hsa-miR-12128 0 1 0
chr3:50252100|50252448 hsa-miR-3663-3p 0 1 0
chr3:50252100|50252448 hsa-miR-4722-5p 1 1 0
chr3:50252100|50252448 hsa-miR-4755-3p 0 1 0
chr3:50252100|50252448 hsa-miR-145-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6875-3p 1 0 0
chr3:50252100|50252448 hsa-miR-4655-5p 1 0 0
chr3:50252100|50252448 hsa-miR-8069 1 0 0
chr3:50252100|50252448 hsa-miR-6845-3p 1 0 0
chr3:50252100|50252448 hsa-miR-3605-5p 0 1 0
chr3:50252100|50252448 hsa-miR-3180-3p 1 0 0
chr3:50252100|50252448 hsa-miR-877-3p 0 1 0
chr3:50252100|50252448 hsa-miR-2467-3p 1 0 0
chr3:50252100|50252448 hsa-miR-4793-3p 0 1 0
chr3:50252100|50252448 hsa-miR-6810-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6882-3p 1 0 0
chr3:50252100|50252448 hsa-miR-4640-5p 1 0 0
chr3:50252100|50252448 hsa-miR-3667-3p 0 1 0
chr3:50252100|50252448 hsa-miR-4690-5p 1 0 0
chr3:50252100|50252448 hsa-miR-7111-3p 1 1 0
chr3:50252100|50252448 hsa-miR-937-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6789-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6828-5p 0 1 0
chr3:50252100|50252448 hsa-miR-194-3p 0 1 0
chr3:50252100|50252448 hsa-miR-7152-3p 0 1 0
chr3:50252100|50252448 hsa-miR-4999-5p 0 1 0
chr3:50252100|50252448 hsa-miR-6867-3p 1 0 0
chr3:50252100|50252448 hsa-miR-4746-3p 1 0 0
chr3:50252100|50252448 hsa-miR-6865-3p 0 1 0
chr3:50252100|50252448 hsa-miR-6826-3p 0 1 0
chr3:50252100|50252448 hsa-miR-5088-3p 0 1 0
chr3:50252100|50252448 hsa-miR-7158-5p 1 0 0
chr3:50252100|50252448 hsa-miR-29b-3p 0 1 0
chr3:50252100|50252448 hsa-miR-4763-3p 1 0 0
chr3:50252100|50252448 hsa-miR-6816-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6743-5p 1 0 0
chr3:50252100|50252448 hsa-miR-6763-5p 0 1 0
chr3:50252100|50252448 hsa-miR-320a-5p 0 1 0
chr3:50252100|50252448 hsa-miR-4685-3p 1 0 0
chr3:50252100|50252448 hsa-miR-6754-3p 0 1 0
chr3:50252100|50252448 hsa-miR-1915-3p 0 1 0
chr3:50252100|50252448 hsa-miR-1909-3p 1 0 0
chr3:50252100|50252448 hsa-miR-328-5p 1 0 0
chr3:50252100|50252448 hsa-miR-449c-5p 0 1 0
chr3:50252100|50252448 hsa-miR-4725-3p 0 1 0
chr3:50252100|50252448 hsa-miR-6777-5p 1 1 0
chr3:50252100|50252448 hsa-miR-6858-5p 1 1 0
chr3:50252100|50252448 hsa-miR-34b-5p 0 1 0
chr3:50252100|50252448 hsa-miR-6511a-5p 1 0 0
chr3:50252100|50252448 hsa-miR-4700-5p 0 1 0
chr3:50252100|50252448 hsa-miR-4667-5p 1 1 0
chr3:50252100|50252448 hsa-miR-3059-5p 1 1 0
chr3:50252100|50252448 hsa-miR-5006-3p 0 1 0
chr3:50252100|50252448 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:50252100|50252448
ORF Type ORF1
Protein Length 82
Nucleotide Length 249
Protein Sequence MPAFLLGVAILVDDPDSQGPGRLVSPGHWEFPRLPGATGTCFREGKTAPDPLGPEGPSASQKILGLAKTGWACSRGQCRPRG
Nucleotide Sequence CTGCCGGCATTCCTCCTCGGAGTAGCCATCCTCGTGGATGATCCTGATAGCCAGGGACCAGGAAGGTTAGTGTCCCCTGGGCACTGGGAGTTCCCACGGCTGCCTGGGGCTACTGGGACCTGCTTCAGAGAAGGGAAAACTGCCCCTGACCCACTGGGACCTGAGGGTCCTTCTGCTTCTCAGAAGATTCTGGGCCTGGCTAAGACTGGCTGGGCCTGTAGTCGGGGGCAGTGCAGGCCCAGAGGGTGA

CircID chr3:50252100|50252448
ORF Type ORF2
Protein Length 77
Nucleotide Length 234
Protein Sequence MGTGSSHGCLGLLGPASEKGKLPLTHWDLRVLLLLRRFWAWLRLAGPVVGGSAGPEGEEGKLEFEHCLWNTALTSSA
Nucleotide Sequence CTGGGCACTGGGAGTTCCCACGGCTGCCTGGGGCTACTGGGACCTGCTTCAGAGAAGGGAAAACTGCCCCTGACCCACTGGGACCTGAGGGTCCTTCTGCTTCTCAGAAGATTCTGGGCCTGGCTAAGACTGGCTGGGCCTGTAGTCGGGGGCAGTGCAGGCCCAGAGGGTGAAGAGGGGAAGCTGGAGTTTGAGCACTGCCTCTGGAATACAGCACTTACTTCATCTGCTTGA

CircID chr3:50252100|50252448
ORF Type ORF3
Protein Length 54
Nucleotide Length 165
Protein Sequence MPPTTGPASLSQAQNLLRSRRTLRSQWVRGSFPFSEAGPSSPRQPWELPVPRGH
Nucleotide Sequence CTGCCCCCGACTACAGGCCCAGCCAGTCTTAGCCAGGCCCAGAATCTTCTGAGAAGCAGAAGGACCCTCAGGTCCCAGTGGGTCAGGGGCAGTTTTCCCTTCTCTGAAGCAGGTCCCAGTAGCCCCAGGCAGCCGTGGGAACTCCCAGTGCCCAGGGGACACTAA

CircID chr3:50252100|50252448
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MYSRGSAQTPASPLHPLGLHCPRLQAQPVLARPRIF
Nucleotide Sequence CTGTATTCCAGAGGCAGTGCTCAAACTCCAGCTTCCCCTCTTCACCCTCTGGGCCTGCACTGCCCCCGACTACAGGCCCAGCCAGTCTTAGCCAGGCCCAGAATCTTCTGA

CircID chr3:50252100|50252448
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MKQVPVAPGSRGNSQCPGDTNLPGPWLSGSSTRMATPRRNAGSTG
Nucleotide Sequence CTGAAGCAGGTCCCAGTAGCCCCAGGCAGCCGTGGGAACTCCCAGTGCCCAGGGGACACTAACCTTCCTGGTCCCTGGCTATCAGGATCATCCACGAGGATGGCTACTCCGAGGAGGAATGCCGGCAGTACCGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites