CircNet

General Information

circRNA Basic Information

CircID	chr3:50318280\|50318396
Strand	+
CircType	exon
Host Gene	ENSG00000068001.12;
Algorism	CIRI2;
Sequence	CTTCCTGCATCTCAGCACCAACAGTTTCCGCCTAGTGCCTGGCCATGCACCTGGTGAACCCCAGCTGCGACCTGTGGGGGAGCTCAGTTGGGCCGACATTGACCACCTGCAGACACA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:50318280\|50318396	hsa-miR-197-5p	0	0	1
chr3:50318280\|50318396	hsa-miR-197-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-143-5p	0	0	1
chr3:50318280\|50318396	hsa-miR-143-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-346	0	0	1
chr3:50318280\|50318396	hsa-miR-632	0	0	1
chr3:50318280\|50318396	hsa-miR-657	0	0	1
chr3:50318280\|50318396	hsa-miR-1226-5p	0	0	1
chr3:50318280\|50318396	hsa-miR-1226-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-1205	0	0	1
chr3:50318280\|50318396	hsa-miR-1286	0	0	1
chr3:50318280\|50318396	hsa-miR-548g-5p	0	0	1
chr3:50318280\|50318396	hsa-miR-548g-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-1184	0	0	1
chr3:50318280\|50318396	hsa-miR-361-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-1207-3p	0	0	1
chr3:50318280\|50318396	hsa-miR-323-5p	0	0	1
chr3:50318280\|50318396	hsa-miR-608	1	0	0
chr3:50318280\|50318396	hsa-miR-636	1	0	0
chr3:50318280\|50318396	hsa-miR-663a	1	0	0
chr3:50318280\|50318396	hsa-miR-762	1	0	0
chr3:50318280\|50318396	hsa-miR-1183	1	0	0
chr3:50318280\|50318396	hsa-miR-4496	1	0	0
chr3:50318280\|50318396	hsa-miR-4673	0	1	0
chr3:50318280\|50318396	hsa-miR-9901	1	0	0
chr3:50318280\|50318396	hsa-miR-4731-5p	0	1	0
chr3:50318280\|50318396	hsa-miR-323a-5p	0	1	0
chr3:50318280\|50318396	hsa-miR-4665-3p	1	0	0
chr3:50318280\|50318396	hsa-miR-25-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-4722-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-4755-3p	0	1	0
chr3:50318280\|50318396	hsa-miR-6821-5p	1	1	0
chr3:50318280\|50318396	hsa-miR-4640-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-1228-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-4733-3p	0	1	0
chr3:50318280\|50318396	hsa-miR-6895-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-6857-3p	0	1	0
chr3:50318280\|50318396	hsa-miR-4763-3p	1	0	0
chr3:50318280\|50318396	hsa-miR-6851-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-6722-3p	1	0	0
chr3:50318280\|50318396	hsa-miR-6797-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-6836-5p	1	0	0
chr3:50318280\|50318396	hsa-miR-6855-5p	0	1	0
chr3:50318280\|50318396	hsa-miR-10394-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:50318280\|50318396
ORF Type	ORF1
Protein Length	37
Nucleotide Length	111
Protein Sequence	MHLSTNSFRLVPGHAPGEPQLRPVGELSWADIDHLQT
Nucleotide Sequence	CTGCATCTCAGCACCAACAGTTTCCGCCTAGTGCCTGGCCATGCACCTGGTGAACCCCAGCTGCGACCTGTGGGGGAGCTCAGTTGGGCCGACATTGACCACCTGCAGACA

CircID	chr3:50318280\|50318396
ORF Type	ORF2
Protein Length	26
Nucleotide Length	78
Protein Sequence	MAMHLVNPSCDLWGSSVGPTLTTCRH
Nucleotide Sequence	CTGGCCATGCACCTGGTGAACCCCAGCTGCGACCTGTGGGGGAGCTCAGTTGGGCCGACATTGACCACCTGCAGACAC

CircID	chr3:50318280\|50318396
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MSAQLSSPTGRSWGSPGAWPGTRRKLLVLRCRK
Nucleotide Sequence	ATGTCGGCCCAACTGAGCTCCCCCACAGGTCGCAGCTGGGGTTCACCAGGTGCATGGCCAGGCACTAGGCGGAAACTGTTGGTGCTGAGATGCAGGAAG

CircID	chr3:50318280\|50318396
ORF Type	ORF4
Protein Length	26
Nucleotide Length	81
Protein Sequence	MQVVNVGPTELPHRSQLGFTRCMARH
Nucleotide Sequence	CTGCAGGTGGTCAATGTCGGCCCAACTGAGCTCCCCCACAGGTCGCAGCTGGGGTTCACCAGGTGCATGGCCAGGCACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information