CircRNA Information

General Information
circRNA Basic Information
CircID chr3:50358677|50358910
Strand +
CircType exon
Host Gene ENSG00000126062.3;
Algorism CIRI2;
Sequence CTCTTTCCTCCCAACTTCTGGATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGGGCGTTTGCTGGAGCCCCTCTGGGGGGCCTTGGAGCTGCTCATCTTCTTCTCAGTGGTGAATGTGTCTGTAGGGCTGCTGGGGGCCTTCGCCTACCTCCTCACCTACATGGCTTCCTTCAACCTGGTCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:50358677|50358910 hsa-let-7b-5p 0 0 1
chr3:50358677|50358910 hsa-let-7b-3p 0 0 1
chr3:50358677|50358910 hsa-let-7c-5p 0 0 1
chr3:50358677|50358910 hsa-let-7c-3p 0 0 1
chr3:50358677|50358910 hsa-let-7d-5p 0 0 1
chr3:50358677|50358910 hsa-let-7d-3p 0 0 1
chr3:50358677|50358910 hsa-let-7e-5p 0 0 1
chr3:50358677|50358910 hsa-let-7e-3p 0 0 1
chr3:50358677|50358910 hsa-miR-98-5p 0 0 1
chr3:50358677|50358910 hsa-miR-98-3p 0 0 1
chr3:50358677|50358910 hsa-miR-197-5p 0 0 1
chr3:50358677|50358910 hsa-miR-197-3p 0 0 1
chr3:50358677|50358910 hsa-miR-198 1 1 1
chr3:50358677|50358910 hsa-miR-181c-5p 0 0 1
chr3:50358677|50358910 hsa-miR-181c-3p 0 0 1
chr3:50358677|50358910 hsa-let-7g-5p 0 0 1
chr3:50358677|50358910 hsa-let-7g-3p 0 0 1
chr3:50358677|50358910 hsa-let-7i-5p 0 0 1
chr3:50358677|50358910 hsa-let-7i-3p 0 0 1
chr3:50358677|50358910 hsa-miR-484 0 0 1
chr3:50358677|50358910 hsa-miR-181d-5p 0 0 1
chr3:50358677|50358910 hsa-miR-181d-3p 0 0 1
chr3:50358677|50358910 hsa-miR-545-5p 0 0 1
chr3:50358677|50358910 hsa-miR-545-3p 0 0 1
chr3:50358677|50358910 hsa-miR-588 0 0 1
chr3:50358677|50358910 hsa-miR-646 0 0 1
chr3:50358677|50358910 hsa-miR-766-5p 0 0 1
chr3:50358677|50358910 hsa-miR-766-3p 0 0 1
chr3:50358677|50358910 hsa-miR-1293 0 0 1
chr3:50358677|50358910 hsa-miR-1253 1 1 1
chr3:50358677|50358910 hsa-miR-1252-5p 0 0 1
chr3:50358677|50358910 hsa-miR-1252-3p 0 0 1
chr3:50358677|50358910 hsa-miR-671-5p 1 1 1
chr3:50358677|50358910 hsa-miR-423-5p 0 0 1
chr3:50358677|50358910 hsa-miR-361-3p 0 1 1
chr3:50358677|50358910 hsa-miR-188-3p 0 0 1
chr3:50358677|50358910 hsa-miR-338-3p 0 0 1
chr3:50358677|50358910 hsa-miR-220b 0 0 1
chr3:50358677|50358910 hsa-miR-1308 0 0 1
chr3:50358677|50358910 hsa-miR-181a 0 0 1
chr3:50358677|50358910 hsa-miR-181b 0 0 1
chr3:50358677|50358910 hsa-let-7a 0 0 1
chr3:50358677|50358910 hsa-let-7f 0 0 1
chr3:50358677|50358910 hsa-miR-1300 0 0 1
chr3:50358677|50358910 hsa-miR-601 1 0 0
chr3:50358677|50358910 hsa-miR-1182 1 0 0
chr3:50358677|50358910 hsa-miR-3185 0 1 0
chr3:50358677|50358910 hsa-miR-3929 0 1 0
chr3:50358677|50358910 hsa-miR-4458 0 1 0
chr3:50358677|50358910 hsa-miR-4493 0 1 0
chr3:50358677|50358910 hsa-miR-4669 1 0 0
chr3:50358677|50358910 hsa-miR-4689 1 1 0
chr3:50358677|50358910 hsa-miR-4710 0 1 0
chr3:50358677|50358910 hsa-miR-6088 1 0 0
chr3:50358677|50358910 hsa-miR-8075 0 1 0
chr3:50358677|50358910 hsa-miR-4435 0 1 0
chr3:50358677|50358910 hsa-miR-6861-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6825-5p 1 0 0
chr3:50358677|50358910 hsa-miR-7847-3p 1 0 0
chr3:50358677|50358910 hsa-miR-4695-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6748-5p 0 1 0
chr3:50358677|50358910 hsa-miR-6772-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6732-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6827-5p 1 1 0
chr3:50358677|50358910 hsa-miR-3944-3p 1 0 0
chr3:50358677|50358910 hsa-miR-4713-3p 1 0 0
chr3:50358677|50358910 hsa-miR-4800-5p 0 1 0
chr3:50358677|50358910 hsa-miR-181b-5p 1 0 0
chr3:50358677|50358910 hsa-miR-3922-5p 0 1 0
chr3:50358677|50358910 hsa-miR-584-3p 0 1 0
chr3:50358677|50358910 hsa-miR-4283 0 1 0
chr3:50358677|50358910 hsa-miR-6767-3p 0 1 0
chr3:50358677|50358910 hsa-miR-4717-5p 0 1 0
chr3:50358677|50358910 hsa-miR-181a-5p 0 1 0
chr3:50358677|50358910 hsa-miR-6769b-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6803-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6851-5p 1 0 0
chr3:50358677|50358910 hsa-miR-1249-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6780a-5p 0 1 0
chr3:50358677|50358910 hsa-miR-7111-5p 1 0 0
chr3:50358677|50358910 hsa-miR-642b-3p 1 1 0
chr3:50358677|50358910 hsa-miR-4632-5p 1 0 0
chr3:50358677|50358910 hsa-miR-4649-5p 1 0 0
chr3:50358677|50358910 hsa-miR-675-5p 1 0 0
chr3:50358677|50358910 hsa-miR-6858-5p 0 1 0
chr3:50358677|50358910 hsa-miR-6845-5p 1 0 0
chr3:50358677|50358910 hsa-miR-4646-5p 1 1 0
chr3:50358677|50358910 hsa-miR-3184-5p 0 1 0
chr3:50358677|50358910 hsa-miR-4701-5p 0 1 0
chr3:50358677|50358910 hsa-miR-642a-3p 1 1 0
chr3:50358677|50358910 hsa-miR-4690-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:50358677|50358910
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence MATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVY
Nucleotide Sequence CTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGGGCGTTTGCTGGAGCCCCTCTGGGGGGCCTTGGAGCTGCTCATCTTCTTCTCAGTGGTGAATGTGTCTGTAGGGCTGCTGGGGGCCTTCGCCTACCTCCTCACCTACATGGCTTCCTTCAACCTGGTCTAC

CircID chr3:50358677|50358910
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence MDLDPGHPWADGAACVGRGHQPDNGGGGRAFAGAPLGGLGAAHLLLSGECVCRAAGGLRLPPHLHGFLQPGL
Nucleotide Sequence CTGGATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGGGCGTTTGCTGGAGCCCCTCTGGGGGGCCTTGGAGCTGCTCATCTTCTTCTCAGTGGTGAATGTGTCTGTAGGGCTGCTGGGGGCCTTCGCCTACCTCCTCACCTACATGGCTTCCTTCAACCTGGTCTA

CircID chr3:50358677|50358910
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MSSSKAPQRGSSKRPATTTVVRLMATSHTCCSISPWVARVQIQKLGGK
Nucleotide Sequence ATGAGCAGCTCCAAGGCCCCCCAGAGGGGCTCCAGCAAACGCCCGGCCACCACCACCGTTGTCAGGCTGATGGCCACGTCCCACACATGCTGCTCCATCAGCCCATGGGTGGCCAGGGTCCAGATCCAGAAGTTGGGAGGAAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites