CircRNA Information

General Information
circRNA Basic Information
CircID chr3:51392450|51392581
Strand +
CircType exon
Host Gene ENSG00000259956.1;
Algorism CIRI2;
Sequence CTTAGCCCTATGGGCCATGTCCAGGTTCTGGAACTTGAGGAAGGCATAGGCACCGCCCTGGCCACGGGCAGGCCTCTTGATGACCACCTCCTCGATGATGCCATATTTCTCGAAGGCCCTTCGCAGCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:51392450|51392581 hsa-miR-183-5p 0 0 1
chr3:51392450|51392581 hsa-miR-183-3p 0 0 1
chr3:51392450|51392581 hsa-miR-335-5p 0 0 1
chr3:51392450|51392581 hsa-miR-335-3p 0 0 1
chr3:51392450|51392581 hsa-miR-539-5p 0 0 1
chr3:51392450|51392581 hsa-miR-539-3p 0 0 1
chr3:51392450|51392581 hsa-miR-558 0 0 1
chr3:51392450|51392581 hsa-miR-611 0 0 1
chr3:51392450|51392581 hsa-miR-619-5p 0 0 1
chr3:51392450|51392581 hsa-miR-619-3p 0 0 1
chr3:51392450|51392581 hsa-miR-1204 0 0 1
chr3:51392450|51392581 hsa-miR-490-3p 0 0 1
chr3:51392450|51392581 hsa-miR-525-5p 0 0 1
chr3:51392450|51392581 hsa-miR-532-5p 0 0 1
chr3:51392450|51392581 hsa-miR-520a-5p 0 0 1
chr3:51392450|51392581 hsa-miR-151-5p 0 0 1
chr3:51392450|51392581 hsa-miR-323-5p 0 0 1
chr3:51392450|51392581 hsa-miR-658 1 0 0
chr3:51392450|51392581 hsa-miR-762 1 0 0
chr3:51392450|51392581 hsa-miR-920 1 0 0
chr3:51392450|51392581 hsa-miR-1182 1 0 0
chr3:51392450|51392581 hsa-miR-3131 1 0 0
chr3:51392450|51392581 hsa-miR-3196 1 0 0
chr3:51392450|51392581 hsa-miR-4253 1 0 0
chr3:51392450|51392581 hsa-miR-4487 1 0 0
chr3:51392450|51392581 hsa-miR-4642 1 0 0
chr3:51392450|51392581 hsa-miR-4689 1 0 0
chr3:51392450|51392581 hsa-miR-4706 1 0 0
chr3:51392450|51392581 hsa-miR-4741 1 0 0
chr3:51392450|51392581 hsa-miR-6765-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6825-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6089 1 0 0
chr3:51392450|51392581 hsa-miR-6829-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6732-5p 1 0 0
chr3:51392450|51392581 hsa-miR-5006-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6824-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6726-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6752-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6754-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6803-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6851-5p 1 0 0
chr3:51392450|51392581 hsa-miR-11181-3p 1 0 0
chr3:51392450|51392581 hsa-miR-6779-5p 1 0 0
chr3:51392450|51392581 hsa-miR-5196-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6777-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6846-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6848-5p 1 0 0
chr3:51392450|51392581 hsa-miR-6858-5p 1 0 0
chr3:51392450|51392581 hsa-miR-939-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:51392450|51392581
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MGHVQVLELEEGIGTALATGRPLDDHLLDDAIFLEGPSQLH
Nucleotide Sequence ATGGGCCATGTCCAGGTTCTGGAACTTGAGGAAGGCATAGGCACCGCCCTGGCCACGGGCAGGCCTCTTGATGACCACCTCCTCGATGATGCCATATTTCTCGAAGGCCCTTCGCAGCTCCAC

CircID chr3:51392450|51392581
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAK
Nucleotide Sequence CTGCGAAGGGCCTTCGAGAAATATGGCATCATCGAGGAGGTGGTCATCAAGAGGCCTGCCCGTGGCCAGGGCGGTGCCTATGCCTTCCTCAAGTTCCAGAACCTGGACATGGCCCATAGGGCTAAG

CircID chr3:51392450|51392581
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MASSRRWSSRGLPVARAVPMPSSSSRTWTWPIGL
Nucleotide Sequence ATGGCATCATCGAGGAGGTGGTCATCAAGAGGCCTGCCCGTGGCCAGGGCGGTGCCTATGCCTTCCTCAAGTTCCAGAACCTGGACATGGCCCATAGGGCTA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites