CircNet

General Information

circRNA Basic Information

CircID	chr3:51393951\|51394093
Strand	+
CircType	exon
Host Gene	ENSG00000259956.1;
Algorism	CIRI2;
Sequence	GCTGGGAAAGACAGGCTTGGGCTAGGCAGTGTCTCTGACGATGACTATCACCATGTGTTCTTCTTCTAGCTTGCCCAATGTCCTTAGTGCTGACTGGAGGTACTGCTGGGAAAAGTCGCAGGGTGGGAAGGCGTAGAGCATGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:51393951\|51394093	hsa-miR-511-5p	0	0	1
chr3:51393951\|51394093	hsa-miR-511-3p	0	0	1
chr3:51393951\|51394093	hsa-miR-1224-3p	0	0	1
chr3:51393951\|51394093	hsa-miR-188-3p	0	0	1
chr3:51393951\|51394093	hsa-miR-1260	0	0	1
chr3:51393951\|51394093	hsa-miR-1280	0	0	1
chr3:51393951\|51394093	hsa-miR-1260a	0	1	0
chr3:51393951\|51394093	hsa-miR-1197	0	1	0
chr3:51393951\|51394093	hsa-miR-1260b	0	1	0
chr3:51393951\|51394093	hsa-miR-3916	0	1	0
chr3:51393951\|51394093	hsa-miR-8080	0	1	0
chr3:51393951\|51394093	hsa-miR-615-3p	0	1	0
chr3:51393951\|51394093	hsa-miR-6880-3p	0	1	0
chr3:51393951\|51394093	hsa-miR-6734-3p	0	1	0
chr3:51393951\|51394093	hsa-miR-6890-3p	0	1	0
chr3:51393951\|51394093	hsa-miR-6805-3p	1	1	0
chr3:51393951\|51394093	hsa-miR-5195-3p	1	0	0
chr3:51393951\|51394093	hsa-miR-5699-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:51393951\|51394093
ORF Type	ORF1
Protein Length	33
Nucleotide Length	102
Protein Sequence	MTMTITMCSSSSLPNVLSADWRYCWEKSQGGKA
Nucleotide Sequence	CTGACGATGACTATCACCATGTGTTCTTCTTCTAGCTTGCCCAATGTCCTTAGTGCTGACTGGAGGTACTGCTGGGAAAAGTCGCAGGGTGGGAAGGCGTAG

CircID	chr3:51393951\|51394093
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MRLFPAVPPVSTKDIGQARRRTHGDSHRQRHCLAQACLSQ
Nucleotide Sequence	CTGCGACTTTTCCCAGCAGTACCTCCAGTCAGCACTAAGGACATTGGGCAAGCTAGAAGAAGAACACATGGTGATAGTCATCGTCAGAGACACTGCCTAGCCCAAGCCTGTCTTTCCCAG

CircID	chr3:51393951\|51394093
ORF Type	ORF3
Protein Length	39
Nucleotide Length	120
Protein Sequence	MLYAFPPCDFSQQYLQSALRTLGKLEEEHMVIVIVRDTA
Nucleotide Sequence	ATGCTCTACGCCTTCCCACCCTGCGACTTTTCCCAGCAGTACCTCCAGTCAGCACTAAGGACATTGGGCAAGCTAGAAGAAGAACACATGGTGATAGTCATCGTCAGAGACACTGCCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information