CircNet

General Information

circRNA Basic Information

CircID	chr3:52509929\|52510056
Strand	+
CircType	exon
Host Gene	ENSG00000010327.9;
Algorism	CIRI2;
Sequence	CTGGCAACACCCTCCTGGCTAACACAGCGGGCATGCAGGTGGCAGTGCTGGGCCAGCCCTGTGGGCCCACAGTCCCCCATGGACTCGTTGCAGAACCGGCCACTGAAGCCAGGGGCACACGTGCCCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:52509929\|52510056	hsa-miR-575	0	0	1
chr3:52509929\|52510056	hsa-miR-609	0	0	1
chr3:52509929\|52510056	hsa-miR-625-5p	0	0	1
chr3:52509929\|52510056	hsa-miR-625-3p	0	0	1
chr3:52509929\|52510056	hsa-miR-891a-5p	0	0	1
chr3:52509929\|52510056	hsa-miR-891a-3p	0	0	1
chr3:52509929\|52510056	hsa-miR-665	0	1	1
chr3:52509929\|52510056	hsa-miR-1202	0	0	1
chr3:52509929\|52510056	hsa-miR-1275	0	0	1
chr3:52509929\|52510056	hsa-miR-296-5p	0	0	1
chr3:52509929\|52510056	hsa-miR-671-3p	1	1	1
chr3:52509929\|52510056	hsa-miR-331-3p	0	0	1
chr3:52509929\|52510056	hsa-miR-220c	0	0	1
chr3:52509929\|52510056	hsa-miR-544	0	0	1
chr3:52509929\|52510056	hsa-miR-1538	1	0	0
chr3:52509929\|52510056	hsa-miR-3147	1	0	0
chr3:52509929\|52510056	hsa-miR-4296	0	1	0
chr3:52509929\|52510056	hsa-miR-4318	0	1	0
chr3:52509929\|52510056	hsa-miR-4322	0	1	0
chr3:52509929\|52510056	hsa-miR-4265	0	1	0
chr3:52509929\|52510056	hsa-miR-4498	0	1	0
chr3:52509929\|52510056	hsa-miR-5693	0	1	0
chr3:52509929\|52510056	hsa-miR-29b-1-5p	0	1	0
chr3:52509929\|52510056	hsa-miR-134-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-6089	1	0	0
chr3:52509929\|52510056	hsa-miR-4722-5p	0	1	0
chr3:52509929\|52510056	hsa-miR-3677-5p	0	1	0
chr3:52509929\|52510056	hsa-miR-6842-3p	1	0	0
chr3:52509929\|52510056	hsa-miR-6772-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-3944-3p	1	0	0
chr3:52509929\|52510056	hsa-miR-4715-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-4743-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-4446-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-1184	0	1	0
chr3:52509929\|52510056	hsa-miR-383-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-6773-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-3152-3p	0	1	0
chr3:52509929\|52510056	hsa-miR-5001-5p	0	1	0
chr3:52509929\|52510056	hsa-miR-6726-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-6752-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-6803-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-328-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-6794-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-939-5p	1	0	0
chr3:52509929\|52510056	hsa-miR-4665-5p	0	1	0
chr3:52509929\|52510056	hsa-miR-6724-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:52509929\|52510056
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	LATPSWLTQRACRWQCWASPVGPQSPMDSLQNRPLKPGAHVP
Nucleotide Sequence	CTGGCAACACCCTCCTGGCTAACACAGCGGGCATGCAGGTGGCAGTGCTGGGCCAGCCCTGTGGGCCCACAGTCCCCCATGGACTCGTTGCAGAACCGGCCACTGAAGCCAGGGGCACACGTGCCC

CircID	chr3:52509929\|52510056
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MANTAGMQVAVLGQPCGPTVPHGLVAEPATEARGTRAL
Nucleotide Sequence	CTGGCTAACACAGCGGGCATGCAGGTGGCAGTGCTGGGCCAGCCCTGTGGGCCCACAGTCCCCCATGGACTCGTTGCAGAACCGGCCACTGAAGCCAGGGGCACACGTGCCCTG

CircID	chr3:52509929\|52510056
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MGDCGPTGLAQHCHLHARCVSQEGVA
Nucleotide Sequence	ATGGGGGACTGTGGGCCCACAGGGCTGGCCCAGCACTGCCACCTGCATGCCCGCTGTGTTAGCCAGGAGGGTGTTGCC

CircID	chr3:52509929\|52510056
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MASVAGSATSPWGTVGPQGWPSTATCMPAVLARRVLP
Nucleotide Sequence	CTGGCTTCAGTGGCCGGTTCTGCAACGAGTCCATGGGGGACTGTGGGCCCACAGGGCTGGCCCAGCACTGCCACCTGCATGCCCGCTGTGTTAGCCAGGAGGGTGTTGCCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information