CircRNA Information

General Information
circRNA Basic Information
CircID chr3:52516199|52516569
Strand +
CircType exon
Host Gene ENSG00000010327.9;
Algorism CIRI2;
Sequence TTCCTAGGGCACTGAGGGCTGGTGATTTTCTGGTCACAGCGGAGGCCCTGCCAGCCCACGTTACAGACACAGCTTCCGTCCCCTTGCAGCCCCTCCTGGCACAGCCCATGGGCACAGTCACACACTGCAGTGGTATAAAGGAGGATAGGAGTTGCCCAGTGCCTCCATCCTGTCCCGGCTGGGGTCTCCAGGCTGCTCTCTGCTGCCAGGAGGCCCACCCCCGCCCCTCCCCAGTCCTCACCTCCGGTGCAGTTGGGCCCGTAGCGGCCCAGCTCACACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:52516199|52516569 hsa-miR-148a-5p 0 0 1
chr3:52516199|52516569 hsa-miR-148a-3p 0 0 1
chr3:52516199|52516569 hsa-miR-152-5p 0 0 1
chr3:52516199|52516569 hsa-miR-152-3p 0 0 1
chr3:52516199|52516569 hsa-miR-134-5p 0 0 1
chr3:52516199|52516569 hsa-miR-134-3p 0 0 1
chr3:52516199|52516569 hsa-miR-184 0 0 1
chr3:52516199|52516569 hsa-miR-148b-5p 0 0 1
chr3:52516199|52516569 hsa-miR-148b-3p 0 0 1
chr3:52516199|52516569 hsa-miR-558 0 0 1
chr3:52516199|52516569 hsa-miR-608 0 1 1
chr3:52516199|52516569 hsa-miR-612 0 1 1
chr3:52516199|52516569 hsa-miR-650 0 0 1
chr3:52516199|52516569 hsa-miR-541-5p 0 0 1
chr3:52516199|52516569 hsa-miR-541-3p 0 0 1
chr3:52516199|52516569 hsa-miR-665 0 0 1
chr3:52516199|52516569 hsa-miR-922 0 1 1
chr3:52516199|52516569 hsa-miR-939-5p 0 0 1
chr3:52516199|52516569 hsa-miR-939-3p 0 0 1
chr3:52516199|52516569 hsa-miR-943 0 0 1
chr3:52516199|52516569 hsa-miR-1226-5p 0 0 1
chr3:52516199|52516569 hsa-miR-1226-3p 0 0 1
chr3:52516199|52516569 hsa-miR-1227-5p 0 0 1
chr3:52516199|52516569 hsa-miR-1227-3p 0 0 1
chr3:52516199|52516569 hsa-miR-1224-5p 1 1 1
chr3:52516199|52516569 hsa-miR-885-3p 0 1 1
chr3:52516199|52516569 hsa-miR-423-5p 0 1 1
chr3:52516199|52516569 hsa-miR-654-5p 0 0 1
chr3:52516199|52516569 hsa-miR-1207-5p 0 0 1
chr3:52516199|52516569 hsa-miR-509-3-5p 0 0 1
chr3:52516199|52516569 hsa-miR-509-5p 0 1 1
chr3:52516199|52516569 hsa-miR-1285 0 0 1
chr3:52516199|52516569 hsa-miR-1254 0 0 1
chr3:52516199|52516569 hsa-miR-663 0 0 1
chr3:52516199|52516569 hsa-miR-663a 1 1 0
chr3:52516199|52516569 hsa-miR-762 1 1 0
chr3:52516199|52516569 hsa-miR-940 1 1 0
chr3:52516199|52516569 hsa-miR-1183 1 1 0
chr3:52516199|52516569 hsa-miR-1203 1 0 0
chr3:52516199|52516569 hsa-miR-1248 0 1 0
chr3:52516199|52516569 hsa-miR-2278 0 1 0
chr3:52516199|52516569 hsa-miR-2861 1 0 0
chr3:52516199|52516569 hsa-miR-3131 1 1 0
chr3:52516199|52516569 hsa-miR-3141 1 0 0
chr3:52516199|52516569 hsa-miR-3196 1 1 0
chr3:52516199|52516569 hsa-miR-4298 1 1 0
chr3:52516199|52516569 hsa-miR-4257 1 0 0
chr3:52516199|52516569 hsa-miR-4254 0 1 0
chr3:52516199|52516569 hsa-miR-3918 0 1 0
chr3:52516199|52516569 hsa-miR-4443 0 1 0
chr3:52516199|52516569 hsa-miR-4463 1 0 0
chr3:52516199|52516569 hsa-miR-4487 0 1 0
chr3:52516199|52516569 hsa-miR-4488 1 0 0
chr3:52516199|52516569 hsa-miR-4492 0 1 0
chr3:52516199|52516569 hsa-miR-4497 1 0 0
chr3:52516199|52516569 hsa-miR-4498 1 1 0
chr3:52516199|52516569 hsa-miR-4505 0 1 0
chr3:52516199|52516569 hsa-miR-2392 1 1 0
chr3:52516199|52516569 hsa-miR-4507 0 1 0
chr3:52516199|52516569 hsa-miR-4512 1 1 0
chr3:52516199|52516569 hsa-miR-4515 1 0 0
chr3:52516199|52516569 hsa-miR-1587 1 1 0
chr3:52516199|52516569 hsa-miR-4651 1 0 0
chr3:52516199|52516569 hsa-miR-4656 1 0 0
chr3:52516199|52516569 hsa-miR-4688 1 0 0
chr3:52516199|52516569 hsa-miR-4689 1 0 0
chr3:52516199|52516569 hsa-miR-4710 1 1 0
chr3:52516199|52516569 hsa-miR-4721 1 0 0
chr3:52516199|52516569 hsa-miR-4741 1 1 0
chr3:52516199|52516569 hsa-miR-4748 1 0 0
chr3:52516199|52516569 hsa-miR-5087 1 0 0
chr3:52516199|52516569 hsa-miR-5090 1 0 0
chr3:52516199|52516569 hsa-miR-5194 0 1 0
chr3:52516199|52516569 hsa-miR-5787 1 0 0
chr3:52516199|52516569 hsa-miR-6085 0 1 0
chr3:52516199|52516569 hsa-miR-6086 1 0 0
chr3:52516199|52516569 hsa-miR-7704 1 0 0
chr3:52516199|52516569 hsa-miR-8052 1 0 0
chr3:52516199|52516569 hsa-miR-8073 1 1 0
chr3:52516199|52516569 hsa-miR-8082 0 1 0
chr3:52516199|52516569 hsa-miR-8089 1 1 0
chr3:52516199|52516569 hsa-miR-9901 1 0 0
chr3:52516199|52516569 hsa-miR-9903 0 1 0
chr3:52516199|52516569 hsa-miR-4433b-3p 1 0 0
chr3:52516199|52516569 hsa-miR-6747-5p 1 0 0
chr3:52516199|52516569 hsa-miR-671-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6825-5p 0 1 0
chr3:52516199|52516569 hsa-miR-6894-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4687-3p 1 0 0
chr3:52516199|52516569 hsa-miR-125a-3p 1 1 0
chr3:52516199|52516569 hsa-miR-6799-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6880-5p 1 1 0
chr3:52516199|52516569 hsa-miR-4695-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6867-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4655-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6716-5p 1 0 0
chr3:52516199|52516569 hsa-miR-1292-5p 1 0 0
chr3:52516199|52516569 hsa-miR-3180-3p 1 0 0
chr3:52516199|52516569 hsa-miR-185-3p 1 0 0
chr3:52516199|52516569 hsa-miR-6829-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6732-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6805-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6798-5p 1 0 0
chr3:52516199|52516569 hsa-miR-3130-3p 1 1 0
chr3:52516199|52516569 hsa-miR-6881-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6782-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6810-5p 1 0 0
chr3:52516199|52516569 hsa-miR-7855-5p 1 0 0
chr3:52516199|52516569 hsa-miR-5006-5p 0 1 0
chr3:52516199|52516569 hsa-miR-6735-3p 1 0 0
chr3:52516199|52516569 hsa-miR-6786-5p 1 0 0
chr3:52516199|52516569 hsa-miR-1229-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6784-5p 1 0 0
chr3:52516199|52516569 hsa-miR-1908-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6771-5p 1 0 0
chr3:52516199|52516569 hsa-miR-92b-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6749-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4787-5p 1 1 0
chr3:52516199|52516569 hsa-miR-149-3p 1 1 0
chr3:52516199|52516569 hsa-miR-2276-3p 0 1 0
chr3:52516199|52516569 hsa-miR-6886-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6781-5p 1 0 0
chr3:52516199|52516569 hsa-miR-34b-3p 0 1 0
chr3:52516199|52516569 hsa-miR-3191-3p 1 1 0
chr3:52516199|52516569 hsa-miR-3120-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6499-3p 0 1 0
chr3:52516199|52516569 hsa-miR-660-3p 0 1 0
chr3:52516199|52516569 hsa-miR-3158-3p 0 1 0
chr3:52516199|52516569 hsa-miR-6868-5p 0 1 0
chr3:52516199|52516569 hsa-miR-2277-5p 1 0 0
chr3:52516199|52516569 hsa-miR-10400-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4763-3p 1 1 0
chr3:52516199|52516569 hsa-miR-6787-5p 0 1 0
chr3:52516199|52516569 hsa-miR-6812-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6816-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6870-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6775-5p 1 1 0
chr3:52516199|52516569 hsa-miR-1343-5p 1 0 0
chr3:52516199|52516569 hsa-miR-3180 1 0 0
chr3:52516199|52516569 hsa-miR-5001-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6726-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6743-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6752-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6756-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6769a-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6803-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6842-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6851-5p 1 1 0
chr3:52516199|52516569 hsa-miR-7110-5p 1 0 0
chr3:52516199|52516569 hsa-miR-1249-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6722-3p 1 0 0
chr3:52516199|52516569 hsa-miR-6763-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6779-5p 1 1 0
chr3:52516199|52516569 hsa-miR-6797-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6879-5p 1 0 0
chr3:52516199|52516569 hsa-miR-7111-5p 1 0 0
chr3:52516199|52516569 hsa-miR-3620-5p 1 1 0
chr3:52516199|52516569 hsa-miR-4728-5p 1 1 0
chr3:52516199|52516569 hsa-miR-5196-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6780b-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6836-5p 0 1 0
chr3:52516199|52516569 hsa-miR-1237-5p 1 0 0
chr3:52516199|52516569 hsa-miR-328-5p 1 1 0
chr3:52516199|52516569 hsa-miR-4649-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4749-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6729-5p 1 0 0
chr3:52516199|52516569 hsa-miR-675-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6794-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6795-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6848-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6858-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6883-5p 0 1 0
chr3:52516199|52516569 hsa-miR-3187-5p 0 1 0
chr3:52516199|52516569 hsa-miR-1285-3p 0 1 0
chr3:52516199|52516569 hsa-miR-4665-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6736-5p 1 0 0
chr3:52516199|52516569 hsa-miR-3116 0 1 0
chr3:52516199|52516569 hsa-miR-4747-5p 1 0 0
chr3:52516199|52516569 hsa-miR-6785-5p 0 1 0
chr3:52516199|52516569 hsa-miR-4667-5p 0 1 0
chr3:52516199|52516569 hsa-miR-3184-5p 0 1 0
chr3:52516199|52516569 hsa-miR-6724-5p 1 0 0
chr3:52516199|52516569 hsa-miR-4757-5p 1 0 0
chr3:52516199|52516569 hsa-miR-33b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:52516199|52516569
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MVIFWSQRRPCQPTLQTQLPSPCSPSWHSPWAQSHTAVV
Nucleotide Sequence CTGGTGATTTTCTGGTCACAGCGGAGGCCCTGCCAGCCCACGTTACAGACACAGCTTCCGTCCCCTTGCAGCCCCTCCTGGCACAGCCCATGGGCACAGTCACACACTGCAGTGGTATAA

CircID chr3:52516199|52516569
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MPSASILSRLGSPGCSLLPGGPPPPLPSPHLRCSWARSGPAHT
Nucleotide Sequence TTGCCCAGTGCCTCCATCCTGTCCCGGCTGGGGTCTCCAGGCTGCTCTCTGCTGCCAGGAGGCCCACCCCCGCCCCTCCCCAGTCCTCACCTCCGGTGCAGTTGGGCCCGTAGCGGCCCAGCTCACACA

CircID chr3:52516199|52516569
ORF Type ORF3
Protein Length 90
Nucleotide Length 270
Protein Sequence MRAGDFLVTAEALPAHVTDTASVPLQPLLAQPMGTVTHCSGIKEDRSCPVPPSCPGWGLQAALCCQEAHPRPSPVLTSGAVGPVAAQLTH
Nucleotide Sequence CTGAGGGCTGGTGATTTTCTGGTCACAGCGGAGGCCCTGCCAGCCCACGTTACAGACACAGCTTCCGTCCCCTTGCAGCCCCTCCTGGCACAGCCCATGGGCACAGTCACACACTGCAGTGGTATAAAGGAGGATAGGAGTTGCCCAGTGCCTCCATCCTGTCCCGGCTGGGGTCTCCAGGCTGCTCTCTGCTGCCAGGAGGCCCACCCCCGCCCCTCCCCAGTCCTCACCTCCGGTGCAGTTGGGCCCGTAGCGGCCCAGCTCACACAC

CircID chr3:52516199|52516569
ORF Type ORF4
Protein Length 90
Nucleotide Length 270
Protein Sequence MGRYGPNCTGGEDWGGAGVGLLAAESSLETPAGTGWRHWATPILLYTTAVCDCAHGLCQEGLQGDGSCVCNVGWQGLRCDQKITSPQCPR
Nucleotide Sequence CTGGGCCGCTACGGGCCCAACTGCACCGGAGGTGAGGACTGGGGAGGGGCGGGGGTGGGCCTCCTGGCAGCAGAGAGCAGCCTGGAGACCCCAGCCGGGACAGGATGGAGGCACTGGGCAACTCCTATCCTCCTTTATACCACTGCAGTGTGTGACTGTGCCCATGGGCTGTGCCAGGAGGGGCTGCAAGGGGACGGAAGCTGTGTCTGTAACGTGGGCTGGCAGGGCCTCCGCTGTGACCAGAAAATCACCAGCCCTCAGTGCCCTAGG

CircID chr3:52516199|52516569
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MQCVTVPMGCARRGCKGTEAVSVTWAGRASAVTRKSPALSALG
Nucleotide Sequence CTGCAGTGTGTGACTGTGCCCATGGGCTGTGCCAGGAGGGGCTGCAAGGGGACGGAAGCTGTGTCTGTAACGTGGGCTGGCAGGGCCTCCGCTGTGACCAGAAAATCACCAGCCCTCAGTGCCCTAGGA

CircID chr3:52516199|52516569
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MGRGGGGPPGSREQPGDPSRDRMEALGNSYPPLYHCSV
Nucleotide Sequence CTGGGGAGGGGCGGGGGTGGGCCTCCTGGCAGCAGAGAGCAGCCTGGAGACCCCAGCCGGGACAGGATGGAGGCACTGGGCAACTCCTATCCTCCTTTATACCACTGCAGTGTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites