CircNet

General Information

circRNA Basic Information

CircID	chr3:52634602\|52668645
Strand	-
CircType	exon
Host Gene	ENSG00000163939.18;
Algorism	CIRI2;DCC;find_circ;
Sequence	CTGCACGCTATGAAGAGGGAGAGTCAGAAGCAGAAAGCATCACTTCCTTTATGGATGTTTCAAATCCTTTTTATCAGCTTTATGACACAGTTAGGAGTTGTCGGAATAACCAAGGGCAGCTAATAGCTGAACCTTTTTACCATTTGCCTTCAAAGAAAAAATACCCTGATTATTACCAGCAAATTAAAATGCCCATATCACTACAACAGATCCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:52634602\|52668645
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQI
Nucleotide Sequence	ATGGATGTTTCAAATCCTTTTTATCAGCTTTATGACACAGTTAGGAGTTGTCGGAATAACCAAGGGCAGCTAATAGCTGAACCTTTTTACCATTTGCCTTCAAAGAAAAAATACCCTGATTATTACCAGCAAATTAAAATGCCCATATCACTACAACAGATC

CircID	chr3:52634602\|52668645
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MKRESQKQKASLPLWMFQILFISFMTQLGVVGITKGS*
Nucleotide Sequence	ATGAAGAGGGAGAGTCAGAAGCAGAAAGCATCACTTCCTTTATGGATGTTTCAAATCCTTTTTATCAGCTTTATGACACAGTTAGGAGTTGTCGGAATAACCAAGGGCAGCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:52634602\|52668645	U2AF2	8	3	1
chr3:52634602\|52668645	ELAVL1	2	4	1
chr3:52634602\|52668645	CELF2	0	1	0
chr3:52634602\|52668645	PUM2	0	1	0
chr3:52634602\|52668645	PRPF8	0	1	0
chr3:52634602\|52668645	UPF1	1	0	0
chr3:52634602\|52668645	TAF15	2	0	1
chr3:52634602\|52668645	FMR1	0	2	1
chr3:52634602\|52668645	NUDT21	1	3	0
chr3:52634602\|52668645	RBM15B	0	1	0
chr3:52634602\|52668645	FUS	0	1	0
chr3:52634602\|52668645	CPSF7	0	1	0
chr3:52634602\|52668645	SRSF1	0	0	2
chr3:52634602\|52668645	NOP58	2	0	2
chr3:52634602\|52668645	NOP56	1	0	0
chr3:52634602\|52668645	DDX54	0	1	6
chr3:52634602\|52668645	PTBP1	0	1	0
chr3:52634602\|52668645	HNRNPC	14	16	0
chr3:52634602\|52668645	TRA2A	0	0	1
chr3:52634602\|52668645	ZNF184	0	1	0
chr3:52634602\|52668645	DDX3X	0	3	0
chr3:52634602\|52668645	ZC3H7B	0	1	0
chr3:52634602\|52668645	LIN28B	0	0	1
chr3:52634602\|52668645	FXR1	0	0	3
chr3:52634602\|52668645	SND1	0	1	1
chr3:52634602\|52668645	IGF2BP1	0	2	4
chr3:52634602\|52668645	IGF2BP3	0	0	1
chr3:52634602\|52668645	IGF2BP2	1	0	4
chr3:52634602\|52668645	TARDBP	0	0	1
chr3:52634602\|52668645	STAU1	1	0	0
chr3:52634602\|52668645	RBFOX2	1	0	0
chr3:52634602\|52668645	RBM47	0	0	2
chr3:52634602\|52668645	DDX24	0	1	0
chr3:52634602\|52668645	CSTF2T	0	0	1
chr3:52634602\|52668645	CSTF2	0	1	0
chr3:52634602\|52668645	TARBP2	1	1	0
chr3:52634602\|52668645	RBM22	0	1	0
chr3:52634602\|52668645	FBL	0	2	0
chr3:52634602\|52668645	ATXN2	0	1	0
chr3:52634602\|52668645	EIF4A3	1	2	2
chr3:52634602\|52668645	AGO2	0	0	1

CircRNA Information