CircRNA Information

General Information
circRNA Basic Information
CircID chr3:52693744|52694103
Strand +
CircType exon
Host Gene ENSG00000163938.15;
Algorism CIRI2;
Sequence CTGCTGTAGTCTCCTCAGACAGTGCCTCCCCTGTCTCTTCTGCAGCAAACATGCCTGAGCTGTTTTCCTGTGTGACAAAGAAAAATAGTGCTGGATTAGTAGCCCTTGTCTGCTCATTTAATCCAAGTAGTTATGTACCTGAAAAATTAACTCTTTGGAGGTACATATAACGGGATGTGCAAAATTAAGGCTAATGGATCACAAGCCTCAAATATTTCCTATCTTCAGTTCCTTCCATTATGTATTATAATGCTAGAAAACTCACTTCAGTTTTAACTCATGGAGGACACACTTACATCAACTTCTTCATCAACAGTTTCCTGGTCACTGTCTTTGTCATCCTCCCTCTCCTCCTGCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:52693744|52694103 hsa-miR-374a-5p 0 0 1
chr3:52693744|52694103 hsa-miR-374a-3p 0 0 1
chr3:52693744|52694103 hsa-miR-377-5p 0 0 1
chr3:52693744|52694103 hsa-miR-377-3p 0 0 1
chr3:52693744|52694103 hsa-miR-507 0 0 1
chr3:52693744|52694103 hsa-miR-557 0 0 1
chr3:52693744|52694103 hsa-miR-570-5p 0 0 1
chr3:52693744|52694103 hsa-miR-570-3p 0 0 1
chr3:52693744|52694103 hsa-miR-573 0 1 1
chr3:52693744|52694103 hsa-miR-595 0 1 1
chr3:52693744|52694103 hsa-miR-606 0 0 1
chr3:52693744|52694103 hsa-miR-640 0 0 1
chr3:52693744|52694103 hsa-miR-650 0 1 1
chr3:52693744|52694103 hsa-miR-655-5p 0 0 1
chr3:52693744|52694103 hsa-miR-655-3p 0 0 1
chr3:52693744|52694103 hsa-miR-765 1 1 1
chr3:52693744|52694103 hsa-miR-298 0 1 1
chr3:52693744|52694103 hsa-miR-890 0 0 1
chr3:52693744|52694103 hsa-miR-374b-5p 0 0 1
chr3:52693744|52694103 hsa-miR-374b-3p 0 0 1
chr3:52693744|52694103 hsa-miR-1179 0 0 1
chr3:52693744|52694103 hsa-miR-548e-5p 0 0 1
chr3:52693744|52694103 hsa-miR-548e-3p 0 0 1
chr3:52693744|52694103 hsa-miR-1304-5p 0 0 1
chr3:52693744|52694103 hsa-miR-1304-3p 0 0 1
chr3:52693744|52694103 hsa-miR-548g-5p 0 0 1
chr3:52693744|52694103 hsa-miR-548g-3p 0 0 1
chr3:52693744|52694103 hsa-miR-1267 0 0 1
chr3:52693744|52694103 hsa-miR-1252-5p 0 0 1
chr3:52693744|52694103 hsa-miR-1252-3p 0 0 1
chr3:52693744|52694103 hsa-miR-1321 1 0 1
chr3:52693744|52694103 hsa-miR-485-5p 0 0 1
chr3:52693744|52694103 hsa-miR-338-3p 0 0 1
chr3:52693744|52694103 hsa-miR-885-5p 0 0 1
chr3:52693744|52694103 hsa-miR-548a-3p 0 0 1
chr3:52693744|52694103 hsa-miR-450b-5p 0 0 1
chr3:52693744|52694103 hsa-miR-590-3p 0 0 1
chr3:52693744|52694103 hsa-miR-369-3p 0 0 1
chr3:52693744|52694103 hsa-miR-548f 0 0 1
chr3:52693744|52694103 hsa-miR-1259 0 0 1
chr3:52693744|52694103 hsa-miR-602 1 1 0
chr3:52693744|52694103 hsa-miR-665 1 0 0
chr3:52693744|52694103 hsa-miR-943 1 0 0
chr3:52693744|52694103 hsa-miR-1275 1 0 0
chr3:52693744|52694103 hsa-miR-3154 1 0 0
chr3:52693744|52694103 hsa-miR-3165 1 0 0
chr3:52693744|52694103 hsa-miR-3166 0 1 0
chr3:52693744|52694103 hsa-miR-3175 1 0 0
chr3:52693744|52694103 hsa-miR-4298 1 0 0
chr3:52693744|52694103 hsa-miR-3612 0 1 0
chr3:52693744|52694103 hsa-miR-3652 1 0 0
chr3:52693744|52694103 hsa-miR-4430 1 0 0
chr3:52693744|52694103 hsa-miR-4462 1 0 0
chr3:52693744|52694103 hsa-miR-4476 1 0 0
chr3:52693744|52694103 hsa-miR-4489 1 1 0
chr3:52693744|52694103 hsa-miR-4496 1 1 0
chr3:52693744|52694103 hsa-miR-4510 0 1 0
chr3:52693744|52694103 hsa-miR-4538 1 0 0
chr3:52693744|52694103 hsa-miR-4644 1 0 0
chr3:52693744|52694103 hsa-miR-4669 1 0 0
chr3:52693744|52694103 hsa-miR-4689 1 1 0
chr3:52693744|52694103 hsa-miR-4739 1 1 0
chr3:52693744|52694103 hsa-miR-5698 1 0 0
chr3:52693744|52694103 hsa-miR-6133 1 1 0
chr3:52693744|52694103 hsa-miR-6165 1 1 0
chr3:52693744|52694103 hsa-miR-8059 1 1 0
chr3:52693744|52694103 hsa-miR-8085 1 0 0
chr3:52693744|52694103 hsa-miR-9500 1 0 0
chr3:52693744|52694103 hsa-miR-12118 1 0 0
chr3:52693744|52694103 hsa-miR-12119 0 1 0
chr3:52693744|52694103 hsa-miR-12122 1 0 0
chr3:52693744|52694103 hsa-miR-4433b-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6734-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4433a-3p 1 0 0
chr3:52693744|52694103 hsa-miR-7106-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6825-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6894-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6854-5p 0 1 0
chr3:52693744|52694103 hsa-miR-6799-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6510-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6804-5p 1 0 0
chr3:52693744|52694103 hsa-miR-1236-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4786-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6515-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6089 1 0 0
chr3:52693744|52694103 hsa-miR-6873-5p 0 1 0
chr3:52693744|52694103 hsa-miR-6880-5p 1 0 0
chr3:52693744|52694103 hsa-miR-7847-3p 1 0 0
chr3:52693744|52694103 hsa-miR-4695-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6744-5p 0 1 0
chr3:52693744|52694103 hsa-miR-6746-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4722-5p 1 1 0
chr3:52693744|52694103 hsa-miR-7845-5p 1 0 0
chr3:52693744|52694103 hsa-miR-3605-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6768-5p 1 1 0
chr3:52693744|52694103 hsa-miR-2467-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6798-5p 1 0 0
chr3:52693744|52694103 hsa-miR-3126-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6782-5p 1 0 0
chr3:52693744|52694103 hsa-miR-3150b-3p 0 1 0
chr3:52693744|52694103 hsa-miR-7109-5p 1 0 0
chr3:52693744|52694103 hsa-miR-185-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4640-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6771-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4787-5p 1 0 0
chr3:52693744|52694103 hsa-miR-149-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6824-5p 1 0 0
chr3:52693744|52694103 hsa-miR-3158-5p 0 1 0
chr3:52693744|52694103 hsa-miR-5010-5p 1 1 0
chr3:52693744|52694103 hsa-miR-519d-5p 0 1 0
chr3:52693744|52694103 hsa-miR-5197-3p 0 1 0
chr3:52693744|52694103 hsa-miR-1207-5p 1 0 0
chr3:52693744|52694103 hsa-miR-1233-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4763-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6769b-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6778-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6870-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6893-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6743-5p 1 0 0
chr3:52693744|52694103 hsa-miR-11181-3p 1 0 0
chr3:52693744|52694103 hsa-miR-1249-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6722-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6779-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6780a-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6797-5p 1 1 0
chr3:52693744|52694103 hsa-miR-6808-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6875-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6879-5p 1 0 0
chr3:52693744|52694103 hsa-miR-7111-5p 1 0 0
chr3:52693744|52694103 hsa-miR-186-3p 0 1 0
chr3:52693744|52694103 hsa-miR-4728-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6780b-5p 1 0 0
chr3:52693744|52694103 hsa-miR-328-5p 1 0 0
chr3:52693744|52694103 hsa-miR-449c-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4649-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6729-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6794-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6795-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6858-5p 0 1 0
chr3:52693744|52694103 hsa-miR-6887-5p 1 0 0
chr3:52693744|52694103 hsa-miR-1266-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6758-5p 1 0 0
chr3:52693744|52694103 hsa-miR-3173-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6876-5p 1 0 0
chr3:52693744|52694103 hsa-miR-6891-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4716-3p 1 0 0
chr3:52693744|52694103 hsa-miR-6785-5p 1 0 0
chr3:52693744|52694103 hsa-miR-4691-5p 0 1 0
chr3:52693744|52694103 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:52693744|52694103
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MCKIKANGSQASNISYLQFLPLCIIMLENSLQF
Nucleotide Sequence ATGTGCAAAATTAAGGCTAATGGATCACAAGCCTCAAATATTTCCTATCTTCAGTTCCTTCCATTATGTATTATAATGCTAGAAAACTCACTTCAGTTTTAA
CircID chr3:52693744|52694103
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MEDTLTSTSSSTVSWSLSLSSSLSSCF
Nucleotide Sequence ATGGAGGACACACTTACATCAACTTCTTCATCAACAGTTTCCTGGTCACTGTCTTTGTCATCCTCCCTCTCCTCCTGCTTC
CircID chr3:52693744|52694103
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MEVHITGCAKLRLMDHKPQIFPIFSSFHYVL
Nucleotide Sequence TTGGAGGTACATATAACGGGATGTGCAAAATTAAGGCTAATGGATCACAAGCCTCAAATATTTCCTATCTTCAGTTCCTTCCATTATGTATTATAA
CircID chr3:52693744|52694103
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MPELFSCVTKKNSAGLVALVCSFNPSSYVPEKLTLWRYI
Nucleotide Sequence ATGCCTGAGCTGTTTTCCTGTGTGACAAAGAAAAATAGTGCTGGATTAGTAGCCCTTGTCTGCTCATTTAATCCAAGTAGTTATGTACCTGAAAAATTAACTCTTTGGAGGTACATATAA
CircID chr3:52693744|52694103
ORF Type ORF5
Protein Length 40
Nucleotide Length 120
Protein Sequence MYYNARKLTSVLTHGGHTYINFFINSFLVTVFVILPLLLL
Nucleotide Sequence ATGTATTATAATGCTAGAAAACTCACTTCAGTTTTAACTCATGGAGGACACACTTACATCAACTTCTTCATCAACAGTTTCCTGGTCACTGTCTTTGTCATCCTCCCTCTCCTCCTGCTT
CircID chr3:52693744|52694103
ORF Type ORF6
Protein Length 39
Nucleotide Length 117
Protein Sequence MSRQGLLIQHYFSLSHRKTAQACLLQKRQGRHCLRRLQQ
Nucleotide Sequence ATGAGCAGACAAGGGCTACTAATCCAGCACTATTTTTCTTTGTCACACAGGAAAACAGCTCAGGCATGTTTGCTGCAGAAGAGACAGGGGAGGCACTGTCTGAGGAGACTACAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab