CircNet

General Information

circRNA Basic Information

CircID	chr3:52752070\|52752256
Strand	+
CircType	exon
Host Gene	ENSG00000114904.11;
Algorism	CIRI2;
Sequence	CTGCAAACAGGACTTGAGCAATACCACAGAACTAGCCACAATCAGTAGCGTAAATATTGACATCTTACCTGCAAAAGGGAGGGATTCAGTGAGTGATGGCTTTGTTCAGGAGAATCAGCCAAGATATTTGGATGCCTCTAATGAGTTAGGAGGTATATGCAGTATTTCTCAAGTGGAAGAGGAGATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:52752070\|52752256	hsa-miR-204-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-204-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-211-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-211-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-217-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-217-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-200b-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-200b-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-137-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-137-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-200c-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-200c-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-448	0	0	1
chr3:52752070\|52752256	hsa-miR-429	0	0	1
chr3:52752070\|52752256	hsa-miR-507	0	0	1
chr3:52752070\|52752256	hsa-miR-539-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-539-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-557	0	0	1
chr3:52752070\|52752256	hsa-miR-580-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-580-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-647	0	0	1
chr3:52752070\|52752256	hsa-miR-657	0	0	1
chr3:52752070\|52752256	hsa-miR-877-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-877-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-1178-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-1178-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-1236-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-1236-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-875-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-509-3-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-509-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-508-3p	0	0	1
chr3:52752070\|52752256	hsa-miR-450b-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-1300	0	0	1
chr3:52752070\|52752256	hsa-miR-219-5p	0	0	1
chr3:52752070\|52752256	hsa-miR-1278	0	1	0
chr3:52752070\|52752256	hsa-miR-4474-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-6842-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-6884-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-5187-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-1304-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-6794-3p	1	0	0
chr3:52752070\|52752256	hsa-miR-6807-3p	1	1	0
chr3:52752070\|52752256	hsa-miR-450a-1-3p	0	1	0
chr3:52752070\|52752256	hsa-miR-148b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:52752070\|52752256
ORF Type	ORF1
Protein Length	58
Nucleotide Length	174
Protein Sequence	MSNTTELATISSVNIDILPAKGRDSVSDGFVQENQPRYLDASNELGGICSISQVEEEM
Nucleotide Sequence	TTGAGCAATACCACAGAACTAGCCACAATCAGTAGCGTAAATATTGACATCTTACCTGCAAAAGGGAGGGATTCAGTGAGTGATGGCTTTGTTCAGGAGAATCAGCCAAGATATTTGGATGCCTCTAATGAGTTAGGAGGTATATGCAGTATTTCTCAAGTGGAAGAGGAGATG

CircID	chr3:52752070\|52752256
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MADSPEQSHHSLNPSLLQVRCQYLRY
Nucleotide Sequence	TTGGCTGATTCTCCTGAACAAAGCCATCACTCACTGAATCCCTCCCTTTTGCAGGTAAGATGTCAATATTTACGCTACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information