CircRNA Information

General Information
circRNA Basic Information
CircID chr3:53185932|53186316
Strand -
CircType exon
Host Gene ENSG00000163932.12;
Algorism CIRI2;
Sequence AGTGGGACCTACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGAGGGCTGTGAGCCGGGCACCTGCTTCCCACCCCACCCTGGCTTCTTCCCGCTTAGGTGGCTGAGGTGGGAGTCTGTGAATCGGGCTGTGGCCCCTGCCCCGTCCTCACCTGCTCAGCACCCGTGTCTCCCCATCAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:53185932|53186316 hsa-miR-15a-5p 0 0 1
chr3:53185932|53186316 hsa-miR-15a-3p 0 0 1
chr3:53185932|53186316 hsa-miR-22-5p 0 0 1
chr3:53185932|53186316 hsa-miR-22-3p 0 0 1
chr3:53185932|53186316 hsa-miR-27a-5p 0 0 1
chr3:53185932|53186316 hsa-miR-27a-3p 0 0 1
chr3:53185932|53186316 hsa-miR-15b-5p 0 0 1
chr3:53185932|53186316 hsa-miR-15b-3p 0 0 1
chr3:53185932|53186316 hsa-miR-27b-5p 0 0 1
chr3:53185932|53186316 hsa-miR-27b-3p 0 0 1
chr3:53185932|53186316 hsa-miR-195-5p 0 0 1
chr3:53185932|53186316 hsa-miR-195-3p 0 0 1
chr3:53185932|53186316 hsa-miR-382-5p 0 0 1
chr3:53185932|53186316 hsa-miR-382-3p 0 0 1
chr3:53185932|53186316 hsa-miR-424-5p 0 0 1
chr3:53185932|53186316 hsa-miR-424-3p 0 0 1
chr3:53185932|53186316 hsa-miR-497-5p 0 0 1
chr3:53185932|53186316 hsa-miR-497-3p 0 0 1
chr3:53185932|53186316 hsa-miR-526b-5p 0 0 1
chr3:53185932|53186316 hsa-miR-526b-3p 0 0 1
chr3:53185932|53186316 hsa-miR-539-5p 0 0 1
chr3:53185932|53186316 hsa-miR-539-3p 0 0 1
chr3:53185932|53186316 hsa-miR-602 1 1 1
chr3:53185932|53186316 hsa-miR-608 0 1 1
chr3:53185932|53186316 hsa-miR-653-5p 0 0 1
chr3:53185932|53186316 hsa-miR-653-3p 0 0 1
chr3:53185932|53186316 hsa-miR-938 0 0 1
chr3:53185932|53186316 hsa-miR-939-5p 0 0 1
chr3:53185932|53186316 hsa-miR-939-3p 0 0 1
chr3:53185932|53186316 hsa-miR-1237-5p 0 0 1
chr3:53185932|53186316 hsa-miR-1237-3p 0 0 1
chr3:53185932|53186316 hsa-miR-548k 0 0 1
chr3:53185932|53186316 hsa-miR-1248 0 0 1
chr3:53185932|53186316 hsa-miR-1262 0 0 1
chr3:53185932|53186316 hsa-miR-513c-5p 0 0 1
chr3:53185932|53186316 hsa-miR-513c-3p 0 0 1
chr3:53185932|53186316 hsa-miR-125a-3p 1 1 1
chr3:53185932|53186316 hsa-miR-1224-5p 0 1 1
chr3:53185932|53186316 hsa-miR-486-3p 0 0 1
chr3:53185932|53186316 hsa-miR-532-3p 0 0 1
chr3:53185932|53186316 hsa-miR-1224-3p 0 1 1
chr3:53185932|53186316 hsa-miR-513a-5p 0 0 1
chr3:53185932|53186316 hsa-miR-1207-5p 0 0 1
chr3:53185932|53186316 hsa-miR-324-3p 0 0 1
chr3:53185932|53186316 hsa-miR-342-5p 0 0 1
chr3:53185932|53186316 hsa-miR-515-5p 0 1 1
chr3:53185932|53186316 hsa-miR-1260 0 0 1
chr3:53185932|53186316 hsa-miR-1280 0 0 1
chr3:53185932|53186316 hsa-miR-16 0 0 1
chr3:53185932|53186316 hsa-miR-7 0 0 1
chr3:53185932|53186316 hsa-miR-520h 0 1 0
chr3:53185932|53186316 hsa-miR-663a 1 0 0
chr3:53185932|53186316 hsa-miR-762 1 0 0
chr3:53185932|53186316 hsa-miR-764 0 1 0
chr3:53185932|53186316 hsa-miR-940 0 1 0
chr3:53185932|53186316 hsa-miR-1260a 0 1 0
chr3:53185932|53186316 hsa-miR-1976 1 0 0
chr3:53185932|53186316 hsa-miR-2110 1 0 0
chr3:53185932|53186316 hsa-miR-1260b 0 1 0
chr3:53185932|53186316 hsa-miR-3185 0 1 0
chr3:53185932|53186316 hsa-miR-4284 0 1 0
chr3:53185932|53186316 hsa-miR-4290 1 1 0
chr3:53185932|53186316 hsa-miR-3665 1 1 0
chr3:53185932|53186316 hsa-miR-4462 0 1 0
chr3:53185932|53186316 hsa-miR-3973 0 1 0
chr3:53185932|53186316 hsa-miR-4651 0 1 0
chr3:53185932|53186316 hsa-miR-4656 1 0 0
chr3:53185932|53186316 hsa-miR-4689 1 0 0
chr3:53185932|53186316 hsa-miR-4706 1 0 0
chr3:53185932|53186316 hsa-miR-4710 0 1 0
chr3:53185932|53186316 hsa-miR-4739 1 0 0
chr3:53185932|53186316 hsa-miR-5695 0 1 0
chr3:53185932|53186316 hsa-miR-6081 0 1 0
chr3:53185932|53186316 hsa-miR-7703 1 0 0
chr3:53185932|53186316 hsa-miR-8089 1 0 0
chr3:53185932|53186316 hsa-miR-12125 0 1 0
chr3:53185932|53186316 hsa-miR-103a-2-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6749-3p 1 0 0
chr3:53185932|53186316 hsa-miR-18a-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6840-3p 0 1 0
chr3:53185932|53186316 hsa-miR-671-5p 0 1 0
chr3:53185932|53186316 hsa-miR-3150a-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6833-5p 0 1 0
chr3:53185932|53186316 hsa-miR-3622a-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6089 1 1 0
chr3:53185932|53186316 hsa-miR-4695-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6727-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6721-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6742-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6748-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6796-5p 0 1 0
chr3:53185932|53186316 hsa-miR-520g-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6728-3p 0 1 0
chr3:53185932|53186316 hsa-miR-7855-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6882-3p 1 1 0
chr3:53185932|53186316 hsa-miR-6786-5p 1 0 0
chr3:53185932|53186316 hsa-miR-4763-5p 1 0 0
chr3:53185932|53186316 hsa-miR-4707-3p 1 0 0
chr3:53185932|53186316 hsa-miR-4786-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6803-3p 0 1 0
chr3:53185932|53186316 hsa-miR-5001-3p 0 1 0
chr3:53185932|53186316 hsa-miR-4690-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6780a-3p 0 1 0
chr3:53185932|53186316 hsa-miR-4667-3p 1 0 0
chr3:53185932|53186316 hsa-miR-149-3p 1 0 0
chr3:53185932|53186316 hsa-miR-6824-5p 1 0 0
chr3:53185932|53186316 hsa-miR-103b 0 1 0
chr3:53185932|53186316 hsa-miR-6743-3p 1 0 0
chr3:53185932|53186316 hsa-miR-1307-3p 1 0 0
chr3:53185932|53186316 hsa-miR-4687-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6804-3p 0 1 0
chr3:53185932|53186316 hsa-miR-744-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6513-3p 0 1 0
chr3:53185932|53186316 hsa-miR-3940-3p 0 1 0
chr3:53185932|53186316 hsa-miR-4632-3p 1 0 0
chr3:53185932|53186316 hsa-miR-671-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6856-3p 0 1 0
chr3:53185932|53186316 hsa-miR-6886-3p 0 1 0
chr3:53185932|53186316 hsa-miR-4749-3p 1 0 0
chr3:53185932|53186316 hsa-miR-328-3p 1 0 0
chr3:53185932|53186316 hsa-miR-1199-3p 1 0 0
chr3:53185932|53186316 hsa-miR-3688-5p 0 1 0
chr3:53185932|53186316 hsa-miR-1233-5p 1 1 0
chr3:53185932|53186316 hsa-miR-4763-3p 1 1 0
chr3:53185932|53186316 hsa-miR-6769b-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6812-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6816-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6870-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6775-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6737-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6743-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6756-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6819-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6722-3p 1 0 0
chr3:53185932|53186316 hsa-miR-5196-5p 1 1 0
chr3:53185932|53186316 hsa-miR-1909-3p 1 1 0
chr3:53185932|53186316 hsa-miR-4685-5p 1 0 0
chr3:53185932|53186316 hsa-miR-4749-5p 1 1 0
chr3:53185932|53186316 hsa-miR-675-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6777-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6794-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6795-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6848-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6887-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6845-5p 0 1 0
chr3:53185932|53186316 hsa-miR-5008-3p 1 0 0
chr3:53185932|53186316 hsa-miR-4665-5p 1 0 0
chr3:53185932|53186316 hsa-miR-6736-5p 1 1 0
chr3:53185932|53186316 hsa-miR-6766-5p 0 1 0
chr3:53185932|53186316 hsa-miR-3184-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6893-3p 1 0 0
chr3:53185932|53186316 hsa-miR-1295b-5p 1 0 0
chr3:53185932|53186316 hsa-miR-103a-1-5p 0 1 0
chr3:53185932|53186316 hsa-miR-6838-5p 0 1 0
chr3:53185932|53186316 hsa-miR-3121-5p 0 1 0
chr3:53185932|53186316 hsa-miR-520a-3p 0 1 0
chr3:53185932|53186316 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:53185932|53186316
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MGKGSFGKVRAVSRAPASHPTLASSRLGG
Nucleotide Sequence CTGGGCAAAGGCAGCTTCGGGAAGGTGAGGGCTGTGAGCCGGGCACCTGCTTCCCACCCCACCCTGGCTTCTTCCCGCTTAGGTGGCTGA

CircID chr3:53185932|53186316
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MWPLPRPHLLSTRVSPSGAAWRAEGQRRVLCHQGPQEGCGPDRRRRGVHHG
Nucleotide Sequence CTGTGGCCCCTGCCCCGTCCTCACCTGCTCAGCACCCGTGTCTCCCCATCAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGA

CircID chr3:53185932|53186316
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTH
Nucleotide Sequence CTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCAC

CircID chr3:53185932|53186316
ORF Type ORF4
Protein Length 77
Nucleotide Length 234
Protein Sequence MGGQQQVQHQQLHLPQGPGQRQLREGEGCEPGTCFPPHPGFFPLRWLRWESVNRAVAPAPSSPAQHPCLPIRCCLES
Nucleotide Sequence CTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGAGGGCTGTGAGCCGGGCACCTGCTTCCCACCCCACCCTGGCTTCTTCCCGCTTAGGTGGCTGAGGTGGGAGTCTGTGAATCGGGCTGTGGCCCCTGCCCCGTCCTCACCTGCTCAGCACCCGTGTCTCCCCATCAGGTGCTGCTTGGAGAGCTGA

CircID chr3:53185932|53186316
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MVHSTSSSIRTTSFLRALMAKYSPLPFSSPSST
Nucleotide Sequence ATGGTGCACTCCACGTCGTCGTCGATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCTTCAGCTCTCCAAGCAGCACCTGA

CircID chr3:53185932|53186316
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MRQVSAPASQPWCTPRRRRSGPHPS
Nucleotide Sequence CTGCGGCAAGTGTCAGCACCCGCTTCTCAACCATGGTGCACTCCACGTCGTCGTCGATCAGGACCACATCCTTCTTGA

CircID chr3:53185932|53186316
ORF Type ORF7
Protein Length 25
Nucleotide Length 78
Protein Sequence MPLPRTLWKMKLLMLHLLLPSQILP
Nucleotide Sequence CTGCCTTTGCCCAGGACCTTGTGGAAGATGAAGTTGTTGATGTTGCACTTGCTGCTGCCCTCCCAGATCTTGCCGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites