CircNet

General Information

circRNA Basic Information

CircID	chr3:53774587\|53781667
Strand	+
CircType	exon
Host Gene	ENSG00000157388.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGTTTGGGAAAGTTGCCATGAGAGATAACAACCAGATCAATAGGAACAATAACTTCCAGACGTTTCCCCAGGCGGTGCTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGGCAGGAGATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGGGAGGAGTATACATGTGGGAGCAACTTTGCCATTGTCTATTTCATCAGTTTTTACATGCTCTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGTCATCATGGATAATTTCGACTATCTGACCCGGGACTGGTCTATTTTGGGGCCTCACCATTTAGATGAATTCAAAAGAATATGGTCAGAATATGACCCTGAGGCAAAGGAACCTGGAGCAAGCTAATGAAGAACTTCGGGCTGTGATAAAGAAAATTTGGAAGAAAACCAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGCTGGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:53774587\|53781667	hsa-miR-22-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:53774587\|53781667
ORF Type	ORF1
Protein Length	133
Nucleotide Length	399
Protein Sequence	MFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKEPGAS*
Nucleotide Sequence	ATGTTTGGGAAAGTTGCCATGAGAGATAACAACCAGATCAATAGGAACAATAACTTCCAGACGTTTCCCCAGGCGGTGCTGCTGCTCTTCAGGTGTGCAACAGGTGAGGCCTGGCAGGAGATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGGGAGGAGTATACATGTGGGAGCAACTTTGCCATTGTCTATTTCATCAGTTTTTACATGCTCTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGTCATCATGGATAATTTCGACTATCTGACCCGGGACTGGTCTATTTTGGGGCCTCACCATTTAGATGAATTCAAAAGAATATGGTCAGAATATGACCCTGAGGCAAAGGAACCTGGAGCAAGCTAA

CircID	chr3:53774587\|53781667
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	MVRPQNRPVPGQIVEIIHDDSHKQIDDQKCTEHVKTDEIDNGKVAPTCILLPGVVI*
Nucleotide Sequence	ATGGTGAGGCCCCAAAATAGACCAGTCCCGGGTCAGATAGTCGAAATTATCCATGATGACAGCCACAAACAGATTGATGATCAGAAATGCACAGAGCATGTAAAAACTGATGAAATAGACAATGGCAAAGTTGCTCCCACATGTATACTCCTCCCCGGGGTTGTAATCTGA

CircID	chr3:53774587\|53781667
ORF Type	ORF3
Protein Length	48
Nucleotide Length	144
Protein Sequence	MNSKEYGQNMTLRQRNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAG
Nucleotide Sequence	ATGAATTCAAAAGAATATGGTCAGAATATGACCCTGAGGCAAAGGAACCTGGAGCAAGCTAATGAAGAACTTCGGGCTGTGATAAAGAAAATTTGGAAGAAAACCAGCATGAAATTACTTGACCAAGTTGTCCCTCCAGCTGGT

CircID	chr3:53774587\|53781667
ORF Type	ORF4
Protein Length	41
Nucleotide Length	123
Protein Sequence	MISCQASPVAHLKSSSTAWGNVWKLLFLLIWLLSLMATFPN
Nucleotide Sequence	ATGATCTCCTGCCAGGCCTCACCTGTTGCACACCTGAAGAGCAGCAGCACCGCCTGGGGAAACGTCTGGAAGTTATTGTTCCTATTGATCTGGTTGTTATCTCTCATGGCAACTTTCCCAAAC

CircID	chr3:53774587\|53781667
ORF Type	ORF5
Protein Length	32
Nucleotide Length	96
Protein Sequence	MWEQLCHCLFHQFLHALCISDHQSVCGCHHG*
Nucleotide Sequence	ATGTGGGAGCAACTTTGCCATTGTCTATTTCATCAGTTTTTACATGCTCTGTGCATTTCTGATCATCAATCTGTTTGTGGCTGTCATCATGGATAA

CircID	chr3:53774587\|53781667
ORF Type	ORF6
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLVFFQIFFITARSSSLACSRFLCLRVIF*
Nucleotide Sequence	ATGCTGGTTTTCTTCCAAATTTTCTTTATCACAGCCCGAAGTTCTTCATTAGCTTGCTCCAGGTTCCTTTGCCTCAGGGTCATATTCTGA

CircID	chr3:53774587\|53781667
ORF Type	ORF7
Protein Length	54
Nucleotide Length	162
Protein Sequence	LRVTELPWETGQHDLLPGLTCCTPEEQQHRLGKRLEVIVPIDLVVISHGNFPKH
Nucleotide Sequence	CTCAGGGTCACAGAGCTTCCCTGGGAGACAGGCCAGCATGATCTCCTGCCAGGCCTCACCTGTTGCACACCTGAAGAGCAGCAGCACCGCCTGGGGAAACGTCTGGAAGTTATTGTTCCTATTGATCTGGTTGTTATCTCTCATGGCAACTTTCCCAAACAT

CircID	chr3:53774587\|53781667
ORF Type	ORF8
Protein Length	53
Nucleotide Length	159
Protein Sequence	VQQVRPGRRSCWPVSQGSSVTLSQITTPGRSIHVGATLPLSISSVFTCSVHF*
Nucleotide Sequence	GTGCAACAGGTGAGGCCTGGCAGGAGATCATGCTGGCCTGTCTCCCAGGGAAGCTCTGTGACCCTGAGTCAGATTACAACCCCGGGGAGGAGTATACATGTGGGAGCAACTTTGCCATTGTCTATTTCATCAGTTTTTACATGCTCTGTGCATTTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:53774587\|53781667	FUS	1	0	0
chr3:53774587\|53781667	FAM120A	0	1	0
chr3:53774587\|53781667	TBRG4	0	1	0
chr3:53774587\|53781667	YTHDF3	0	1	0
chr3:53774587\|53781667	YTHDF2	0	4	0
chr3:53774587\|53781667	YTHDF1	0	10	0
chr3:53774587\|53781667	UPF1	0	3	0
chr3:53774587\|53781667	TAF15	0	1	0
chr3:53774587\|53781667	CPSF7	0	1	0
chr3:53774587\|53781667	RBM15B	0	4	0
chr3:53774587\|53781667	XRCC6	0	1	0
chr3:53774587\|53781667	EIF3H	0	6	0
chr3:53774587\|53781667	SRSF1	0	2	0
chr3:53774587\|53781667	U2AF1	0	1	0
chr3:53774587\|53781667	DDX54	0	0	2
chr3:53774587\|53781667	LSM11	0	1	0
chr3:53774587\|53781667	RBM15	0	3	0
chr3:53774587\|53781667	HNRNPC	0	1	0
chr3:53774587\|53781667	DDX3X	0	5	0
chr3:53774587\|53781667	LIN28B	0	2	0
chr3:53774587\|53781667	TARDBP	3	1	0
chr3:53774587\|53781667	YTHDC1	0	5	0
chr3:53774587\|53781667	RBFOX2	1	0	0
chr3:53774587\|53781667	SLTM	0	1	0
chr3:53774587\|53781667	CSTF2T	0	1	0
chr3:53774587\|53781667	CSTF2	0	1	0
chr3:53774587\|53781667	DKC1	1	0	0
chr3:53774587\|53781667	ATXN2	0	4	0
chr3:53774587\|53781667	EIF4A3	1	0	1
chr3:53774587\|53781667	FBL	0	1	1

CircRNA Information