CircNet

General Information

circRNA Basic Information

CircID	chr3:56641486\|56641681
Strand	+
CircType	exon
Host Gene	ENSG00000163946.12;
Algorism	CIRI2;
Sequence	TCCGGCATTGCTGACATCCATAGGCTGTTTAATTGGTTATCAGAAACACTAGCAAATGCGCGCCATTCTGATGCATCTCTGACAGACACAGTCAACAAAGCCTTAGGATTGAGCACTGATGATGCCTATGAAGAGCTGAGGCAAAAACATGAGTATGAGTTGAACTCTACCCCAGATAAGAAAGACTATGAGCAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:56641486\|56641681	hsa-miR-148a-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-148a-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-152-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-152-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-148b-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-148b-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-376b-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-376b-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-545-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-545-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-637	0	0	1
chr3:56641486\|56641681	hsa-miR-652-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-652-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-653-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-653-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-892a	0	0	1
chr3:56641486\|56641681	hsa-miR-943	0	0	1
chr3:56641486\|56641681	hsa-miR-1246	0	0	1
chr3:56641486\|56641681	hsa-miR-129-5p	0	0	1
chr3:56641486\|56641681	hsa-miR-767-3p	0	0	1
chr3:56641486\|56641681	hsa-miR-376a	0	0	1
chr3:56641486\|56641681	hsa-miR-608	1	0	0
chr3:56641486\|56641681	hsa-miR-3132	0	1	0
chr3:56641486\|56641681	hsa-miR-7114-5p	1	0	0
chr3:56641486\|56641681	hsa-miR-6782-5p	1	0	0
chr3:56641486\|56641681	hsa-miR-6847-3p	0	1	0
chr3:56641486\|56641681	hsa-miR-7158-5p	0	1	0
chr3:56641486\|56641681	hsa-miR-3152-5p	0	1	0
chr3:56641486\|56641681	hsa-miR-6819-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:56641486\|56641681
ORF Type	ORF1
Protein Length	57
Nucleotide Length	171
Protein Sequence	MFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQ
Nucleotide Sequence	CTGTTTAATTGGTTATCAGAAACACTAGCAAATGCGCGCCATTCTGATGCATCTCTGACAGACACAGTCAACAAAGCCTTAGGATTGAGCACTGATGATGCCTATGAAGAGCTGAGGCAAAAACATGAGTATGAGTTGAACTCTACCCCAGATAAGAAAGACTATGAGCAG

CircID	chr3:56641486\|56641681
ORF Type	ORF2
Protein Length	30
Nucleotide Length	93
Protein Sequence	LLIVFLIWGRVQLILMFLPQLFIGIISAQS
Nucleotide Sequence	CTGCTCATAGTCTTTCTTATCTGGGGTAGAGTTCAACTCATACTCATGTTTTTGCCTCAGCTCTTCATAGGCATCATCAGTGCTCAATCCTAA

CircID	chr3:56641486\|56641681
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLTVSVRDASEWRAFASVSDNQLNSLWMSAMP
Nucleotide Sequence	TTGTTGACTGTGTCTGTCAGAGATGCATCAGAATGGCGCGCATTTGCTAGTGTTTCTGATAACCAATTAAACAGCCTATGGATGTCAGCAATGCCG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information