CircRNA Information

General Information
circRNA Basic Information
CircID chr3:58171454|58171673
Strand -
CircType exon
Host Gene ENSG00000136068.13;
Algorism CIRI2;
Sequence CATCCCGGCAGTCATGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCCTTTTAACCAACACTAGCCCTTGTTTTTAACACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGATTAACGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:58171454|58171673 hsa-miR-31-5p 0 0 1
chr3:58171454|58171673 hsa-miR-31-3p 0 0 1
chr3:58171454|58171673 hsa-miR-96-5p 0 0 1
chr3:58171454|58171673 hsa-miR-96-3p 0 0 1
chr3:58171454|58171673 hsa-miR-182-5p 0 0 1
chr3:58171454|58171673 hsa-miR-182-3p 0 0 1
chr3:58171454|58171673 hsa-miR-1271-5p 0 0 1
chr3:58171454|58171673 hsa-miR-1271-3p 0 0 1
chr3:58171454|58171673 hsa-miR-298 0 0 1
chr3:58171454|58171673 hsa-miR-890 0 0 1
chr3:58171454|58171673 hsa-miR-548p 0 0 1
chr3:58171454|58171673 hsa-miR-296-5p 0 0 1
chr3:58171454|58171673 hsa-miR-509-3-5p 0 0 1
chr3:58171454|58171673 hsa-miR-509-5p 0 0 1
chr3:58171454|58171673 hsa-miR-548d-3p 0 0 1
chr3:58171454|58171673 hsa-miR-9 0 0 1
chr3:58171454|58171673 hsa-miR-499-5p 0 0 1
chr3:58171454|58171673 hsa-miR-608 1 0 0
chr3:58171454|58171673 hsa-miR-638 1 0 0
chr3:58171454|58171673 hsa-miR-762 1 1 0
chr3:58171454|58171673 hsa-miR-1268a 1 0 0
chr3:58171454|58171673 hsa-miR-1269a 1 0 0
chr3:58171454|58171673 hsa-miR-3128 0 1 0
chr3:58171454|58171673 hsa-miR-378b 1 0 0
chr3:58171454|58171673 hsa-miR-3135a 1 0 0
chr3:58171454|58171673 hsa-miR-378c 1 0 0
chr3:58171454|58171673 hsa-miR-3652 1 1 0
chr3:58171454|58171673 hsa-miR-3936 0 1 0
chr3:58171454|58171673 hsa-miR-1268b 1 0 0
chr3:58171454|58171673 hsa-miR-4430 1 1 0
chr3:58171454|58171673 hsa-miR-3135b 1 1 0
chr3:58171454|58171673 hsa-miR-4476 0 1 0
chr3:58171454|58171673 hsa-miR-4492 1 1 0
chr3:58171454|58171673 hsa-miR-4498 1 0 0
chr3:58171454|58171673 hsa-miR-4507 1 0 0
chr3:58171454|58171673 hsa-miR-4508 1 0 0
chr3:58171454|58171673 hsa-miR-4512 1 0 0
chr3:58171454|58171673 hsa-miR-4516 1 0 0
chr3:58171454|58171673 hsa-miR-1269b 1 0 0
chr3:58171454|58171673 hsa-miR-4533 1 0 0
chr3:58171454|58171673 hsa-miR-1587 1 0 0
chr3:58171454|58171673 hsa-miR-4538 1 0 0
chr3:58171454|58171673 hsa-miR-3978 1 0 0
chr3:58171454|58171673 hsa-miR-4648 1 0 0
chr3:58171454|58171673 hsa-miR-4654 1 0 0
chr3:58171454|58171673 hsa-miR-4656 1 0 0
chr3:58171454|58171673 hsa-miR-4688 1 0 0
chr3:58171454|58171673 hsa-miR-4739 1 0 0
chr3:58171454|58171673 hsa-miR-5694 1 0 0
chr3:58171454|58171673 hsa-miR-5787 1 0 0
chr3:58171454|58171673 hsa-miR-6085 1 0 0
chr3:58171454|58171673 hsa-miR-6132 1 0 0
chr3:58171454|58171673 hsa-miR-8052 1 1 0
chr3:58171454|58171673 hsa-miR-8063 0 1 0
chr3:58171454|58171673 hsa-miR-6734-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4687-3p 1 0 0
chr3:58171454|58171673 hsa-miR-6867-5p 1 1 0
chr3:58171454|58171673 hsa-miR-7160-5p 1 0 0
chr3:58171454|58171673 hsa-miR-7845-5p 1 0 0
chr3:58171454|58171673 hsa-miR-1288-3p 1 0 0
chr3:58171454|58171673 hsa-miR-6829-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6782-5p 1 0 0
chr3:58171454|58171673 hsa-miR-1226-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4738-3p 0 1 0
chr3:58171454|58171673 hsa-miR-3614-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6823-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4713-3p 1 0 0
chr3:58171454|58171673 hsa-miR-3202 0 1 0
chr3:58171454|58171673 hsa-miR-6834-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4446-3p 1 1 0
chr3:58171454|58171673 hsa-miR-149-3p 1 0 0
chr3:58171454|58171673 hsa-miR-6830-5p 1 1 0
chr3:58171454|58171673 hsa-miR-3925-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6781-5p 1 0 0
chr3:58171454|58171673 hsa-miR-574-5p 1 0 0
chr3:58171454|58171673 hsa-miR-3678-3p 0 1 0
chr3:58171454|58171673 hsa-miR-423-5p 1 0 0
chr3:58171454|58171673 hsa-miR-744-5p 1 0 0
chr3:58171454|58171673 hsa-miR-2276-5p 0 1 0
chr3:58171454|58171673 hsa-miR-3152-3p 1 1 0
chr3:58171454|58171673 hsa-miR-1207-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4763-3p 1 0 0
chr3:58171454|58171673 hsa-miR-6893-5p 1 0 0
chr3:58171454|58171673 hsa-miR-5001-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6743-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6752-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6756-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6813-5p 1 1 0
chr3:58171454|58171673 hsa-miR-1249-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6774-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6779-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6780a-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6797-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6808-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6875-5p 1 0 0
chr3:58171454|58171673 hsa-miR-3620-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4728-5p 1 0 0
chr3:58171454|58171673 hsa-miR-5196-5p 1 0 0
chr3:58171454|58171673 hsa-miR-10396a-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4685-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6858-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6883-5p 1 0 0
chr3:58171454|58171673 hsa-miR-939-5p 1 0 0
chr3:58171454|58171673 hsa-miR-3940-5p 1 0 0
chr3:58171454|58171673 hsa-miR-6891-5p 1 0 0
chr3:58171454|58171673 hsa-miR-378a-3p 1 0 0
chr3:58171454|58171673 hsa-miR-6785-5p 1 0 0
chr3:58171454|58171673 hsa-miR-4757-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:58171454|58171673
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MKKFCSGEQFPTCQRSLLTNTSPCF
Nucleotide Sequence CTGAAGAAATTCTGCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCCTTTTAACCAACACTAGCCCTTGTTTTTAA

CircID chr3:58171454|58171673
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MASGKLLATAEFLQTKEGTETDLEN
Nucleotide Sequence TTGGCAAGTGGGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGACTTGGAAAACTAA

CircID chr3:58171454|58171673
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MVKRDLWQVGNCSPLQNFFRPRKGLKRTWKTKAKP
Nucleotide Sequence TTGGTTAAAAGGGATCTTTGGCAAGTGGGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGACTTGGAAAACTAAAGCAAAACCATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites