CircNet

General Information

circRNA Basic Information

CircID	chr3:70965890\|70978029
Strand	-
CircType	exon
Host Gene	ENSG00000114861.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTTACCTCATACTCCAACGACCCCAACCGCCCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTACTCAGACAAATACAACGTGCCCATTTCGTCAGCAGATATTGCGCAGAACCAAGAATTTTATAAGAACGCAGAAGTTAGACCACCATTTACATATGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACTAAATGAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTGTGCGAGTAGAAAACGTTAAAGGGGCAGTATGGACAGTGGATGAAGTAGAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCTTTACAGAACTGTTCAGGTTTCATCTCTGAACATTTGCTTTTGGCATCTTCTTCAGTAGCCCAAAACTGTCCTGCCGTTTTCCAAGAACACTTTCCGTCCATAATGAGGCAAGGGGAATAAATTGATACAAATTCATGATTTGAGAAGTGGATTGTTTCCCTCTCTTCTACGAGTTTGGATCCCTGATCAGTAGACAGACACATAAGACAACTCATATTCGAAAGCCCGTCTAAACCATGTGACTACCAAGCAGGACCAAATTGAGTCCTTCCTACCCACAGGCACTTGGTCCCCCCTGGCCCCCAGTTAGCTCTTCAAAACCAAGCTTGGGACAGGTGCCACGAGTCGTTTTTAAAGCAAAATCTTTCAACACCTCTTAGAAACTTGTATTTGCCAGCCATGCTACAATTAACTCAAACTGAAGATTATCGAGTACACCCATAATTAGTAGTTTCCTTGTCTTACATACCCTGTGTCTTCATAAATTTTCTCTTGGTTGATGACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr3:70965890\|70978029	hsa-miR-103a-2-5p	1	1
chr3:70965890\|70978029	hsa-miR-222-5p	1	1
chr3:70965890\|70978029	hsa-miR-27b-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:70965890\|70978029
ORF Type	ORF1
Protein Length	139
Nucleotide Length	417
Protein Sequence	MHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQKISGVPFAPTSHCISALSE*
Nucleotide Sequence	ATGCACACGGTGGGACCCATCCGCAGGCGGTACTCAGACAAATACAACGTGCCCATTTCGTCAGCAGATATTGCGCAGAACCAAGAATTTTATAAGAACGCAGAAGTTAGACCACCATTTACATATGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACTAAATGAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTGTGCGAGTAGAAAACGTTAAAGGGGCAGTATGGACAGTGGATGAAGTAGAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAG

CircID	chr3:70965890\|70978029
ORF Type	ORF2
Protein Length	80
Nucleotide Length	240
Protein Sequence	MSCLMCLSTDQGSKLVEERETIHFSNHEFVSIYSPCLIMDGKCSWKTAGQFWATEEDAKSKCSEMKPEQFCKAALRGVQ*
Nucleotide Sequence	ATGAGTTGTCTTATGTGTCTGTCTACTGATCAGGGATCCAAACTCGTAGAAGAGAGGGAAACAATCCACTTCTCAAATCATGAATTTGTATCAATTTATTCCCCTTGCCTCATTATGGACGGAAAGTGTTCTTGGAAAACGGCAGGACAGTTTTGGGCTACTGAAGAAGATGCCAAAAGCAAATGTTCAGAGATGAAACCTGAACAGTTCTGTAAAGCTGCATTGAGAGGTGTGCAGTAG

CircID	chr3:70965890\|70978029
ORF Type	ORF3
Protein Length	80
Nucleotide Length	240
Protein Sequence	MSLGPFGQLMMKSLNVAAIFNEAVLANTAPMKTLTSLSHITLPLLKTCRAATPTAHLSMQLYRTVQVSSLNICFWHLLQ*
Nucleotide Sequence	ATGAGTTTGGGTCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCTTTACAGAACTGTTCAGGTTTCATCTCTGAACATTTGCTTTTGGCATCTTCTTCAGTAG

CircID	chr3:70965890\|70978029
ORF Type	ORF4
Protein Length	54
Nucleotide Length	162
Protein Sequence	MQSSHAYCTPLNAALQNCSGFISEHLLLASSSVAQNCPAVFQEHFPSIMRQGE*
Nucleotide Sequence	ATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCTTTACAGAACTGTTCAGGTTTCATCTCTGAACATTTGCTTTTGGCATCTTCTTCAGTAGCCCAAAACTGTCCTGCCGTTTTCCAAGAACACTTTCCGTCCATAATGAGGCAAGGGGAATAA

CircID	chr3:70965890\|70978029
ORF Type	ORF5
Protein Length	53
Nucleotide Length	159
Protein Sequence	MAENSIPLYTTASMGNPTLGNLASAIREELNGAMEHTNSNESDSSPGRSPMQA
Nucleotide Sequence	ATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCC

CircID	chr3:70965890\|70978029
ORF Type	ORF6
Protein Length	50
Nucleotide Length	150
Protein Sequence	MCDKLVKVFIGAVFARTASLNMAATFKLFIINCPKGPKLILYSDKALMQ*
Nucleotide Sequence	ATGTGCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACCCAAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTGA

CircID	chr3:70965890\|70978029
ORF Type	ORF7
Protein Length	43
Nucleotide Length	129
Protein Sequence	MGTLYLSEYRLRMGPTVCMLVVVMTEGPWVTGVRGAVGVVGV*
Nucleotide Sequence	ATGGGCACGTTGTATTTGTCTGAGTACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCTTGGGTGACGGGAGTCAGGGGGGCGGTTGGGGTCGTTGGAGTATGA

CircID	chr3:70965890\|70978029
ORF Type	ORF8
Protein Length	39
Nucleotide Length	117
Protein Sequence	MNLYQFIPLASLWTESVLGKRQDSFGLLKKMPKANVQR*
Nucleotide Sequence	ATGAATTTGTATCAATTTATTCCCCTTGCCTCATTATGGACGGAAAGTGTTCTTGGAAAACGGCAGGACAGTTTTGGGCTACTGAAGAAGATGCCAAAAGCAAATGTTCAGAGATGA

CircID	chr3:70965890\|70978029
ORF Type	ORF9
Protein Length	38
Nucleotide Length	114
Protein Sequence	MRSITGSHECLLTSDATRPRGRMQCVIILVFTSVLCE*
Nucleotide Sequence	ATGAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTGTGCGAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:70965890\|70978029	U2AF2	5	3	2
chr3:70965890\|70978029	ELAVL1	0	0	4
chr3:70965890\|70978029	SF3B4	2	0	0
chr3:70965890\|70978029	PRPF8	0	1	2
chr3:70965890\|70978029	TAF15	1	3	0
chr3:70965890\|70978029	FMR1	0	0	1
chr3:70965890\|70978029	NUDT21	1	0	0
chr3:70965890\|70978029	CPSF4	0	1	0
chr3:70965890\|70978029	FUS	2	2	1
chr3:70965890\|70978029	DGCR8	0	1	0
chr3:70965890\|70978029	NOP58	0	0	4
chr3:70965890\|70978029	NOP56	0	0	1
chr3:70965890\|70978029	DDX54	0	0	13
chr3:70965890\|70978029	RBM10	1	0	0
chr3:70965890\|70978029	PTBP1	3	0	7
chr3:70965890\|70978029	HNRNPC	1	0	0
chr3:70965890\|70978029	MSI2	0	0	1
chr3:70965890\|70978029	HNRNPA1	2	0	0
chr3:70965890\|70978029	IGF2BP1	0	0	10
chr3:70965890\|70978029	IGF2BP3	0	0	9
chr3:70965890\|70978029	IGF2BP2	1	0	7
chr3:70965890\|70978029	TARDBP	1	0	0
chr3:70965890\|70978029	BUD13	0	1	1
chr3:70965890\|70978029	RBFOX2	1	0	0
chr3:70965890\|70978029	RBM47	0	0	4
chr3:70965890\|70978029	CSTF2T	0	0	2
chr3:70965890\|70978029	SRRM4	1	0	0
chr3:70965890\|70978029	FBL	0	0	4
chr3:70965890\|70978029	EIF4A3	0	2	12
chr3:70965890\|70978029	AGO2	0	0	12

CircRNA Information