CircRNA Information

General Information
circRNA Basic Information
CircID chr3:73383570|73383785
Strand -
CircType exon
Host Gene ENSG00000121440.13;
Algorism CIRI2;
Sequence CTGCTCTGCATCATGAACTCGCGCCGCCGCCGCTGCTCCTTGGCCTTCACCAGGTGCTGCTTCCTCTCCTCCTTGCTCCAGTAGCGCCCCATCTTCATCTCGCTCACCGCGTCGTCGTCGGTGGTCATGCCGCTGCGCTCTTCCCGGATCTTCAGGGCGCGCTCCCGCAGCAGGCGGTCCCGCACGGGCCTCTTGGTGATGTAGCGCGTCCCGTCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:73383570|73383785 hsa-miR-15a-5p 0 0 1
chr3:73383570|73383785 hsa-miR-15a-3p 0 0 1
chr3:73383570|73383785 hsa-miR-221-5p 0 0 1
chr3:73383570|73383785 hsa-miR-221-3p 0 0 1
chr3:73383570|73383785 hsa-miR-222-5p 0 0 1
chr3:73383570|73383785 hsa-miR-222-3p 0 0 1
chr3:73383570|73383785 hsa-miR-15b-5p 0 0 1
chr3:73383570|73383785 hsa-miR-15b-3p 0 0 1
chr3:73383570|73383785 hsa-miR-143-5p 0 0 1
chr3:73383570|73383785 hsa-miR-143-3p 0 0 1
chr3:73383570|73383785 hsa-miR-195-5p 0 0 1
chr3:73383570|73383785 hsa-miR-195-3p 0 0 1
chr3:73383570|73383785 hsa-miR-370-5p 0 0 1
chr3:73383570|73383785 hsa-miR-370-3p 0 0 1
chr3:73383570|73383785 hsa-miR-424-5p 0 0 1
chr3:73383570|73383785 hsa-miR-424-3p 0 0 1
chr3:73383570|73383785 hsa-miR-433-5p 0 0 1
chr3:73383570|73383785 hsa-miR-433-3p 0 0 1
chr3:73383570|73383785 hsa-miR-497-5p 0 0 1
chr3:73383570|73383785 hsa-miR-497-3p 0 0 1
chr3:73383570|73383785 hsa-miR-503-5p 0 0 1
chr3:73383570|73383785 hsa-miR-503-3p 0 0 1
chr3:73383570|73383785 hsa-miR-765 1 1 1
chr3:73383570|73383785 hsa-miR-1206 0 0 1
chr3:73383570|73383785 hsa-miR-1243 0 0 1
chr3:73383570|73383785 hsa-miR-1322 0 0 1
chr3:73383570|73383785 hsa-miR-16 0 0 1
chr3:73383570|73383785 hsa-miR-499-3p 0 0 1
chr3:73383570|73383785 hsa-miR-608 1 0 0
chr3:73383570|73383785 hsa-miR-638 1 0 0
chr3:73383570|73383785 hsa-miR-663a 1 0 0
chr3:73383570|73383785 hsa-miR-920 1 0 0
chr3:73383570|73383785 hsa-miR-1270 0 1 0
chr3:73383570|73383785 hsa-miR-1469 1 0 0
chr3:73383570|73383785 hsa-miR-3125 0 1 0
chr3:73383570|73383785 hsa-miR-3154 1 0 0
chr3:73383570|73383785 hsa-miR-3174 1 0 0
chr3:73383570|73383785 hsa-miR-3175 1 1 0
chr3:73383570|73383785 hsa-miR-3196 1 0 0
chr3:73383570|73383785 hsa-miR-4304 0 1 0
chr3:73383570|73383785 hsa-miR-4270 1 1 0
chr3:73383570|73383785 hsa-miR-3916 0 1 0
chr3:73383570|73383785 hsa-miR-4443 1 0 0
chr3:73383570|73383785 hsa-miR-3135b 1 0 0
chr3:73383570|73383785 hsa-miR-4466 1 0 0
chr3:73383570|73383785 hsa-miR-4467 1 1 0
chr3:73383570|73383785 hsa-miR-2392 1 0 0
chr3:73383570|73383785 hsa-miR-3960 1 1 0
chr3:73383570|73383785 hsa-miR-4634 1 0 0
chr3:73383570|73383785 hsa-miR-4647 1 1 0
chr3:73383570|73383785 hsa-miR-4651 1 0 0
chr3:73383570|73383785 hsa-miR-4688 1 0 0
chr3:73383570|73383785 hsa-miR-4689 1 0 0
chr3:73383570|73383785 hsa-miR-4706 1 0 0
chr3:73383570|73383785 hsa-miR-4710 1 0 0
chr3:73383570|73383785 hsa-miR-4734 0 1 0
chr3:73383570|73383785 hsa-miR-4739 1 1 0
chr3:73383570|73383785 hsa-miR-5090 1 0 0
chr3:73383570|73383785 hsa-miR-5572 1 0 0
chr3:73383570|73383785 hsa-miR-5682 0 1 0
chr3:73383570|73383785 hsa-miR-5787 1 0 0
chr3:73383570|73383785 hsa-miR-6077 0 1 0
chr3:73383570|73383785 hsa-miR-6081 1 1 0
chr3:73383570|73383785 hsa-miR-6088 1 1 0
chr3:73383570|73383785 hsa-miR-6090 1 0 0
chr3:73383570|73383785 hsa-miR-6126 1 1 0
chr3:73383570|73383785 hsa-miR-6133 1 0 0
chr3:73383570|73383785 hsa-miR-6860 1 0 0
chr3:73383570|73383785 hsa-miR-6863 1 0 0
chr3:73383570|73383785 hsa-miR-8072 1 0 0
chr3:73383570|73383785 hsa-miR-8085 1 0 0
chr3:73383570|73383785 hsa-miR-12115 1 0 0
chr3:73383570|73383785 hsa-miR-12118 1 1 0
chr3:73383570|73383785 hsa-miR-4433b-3p 1 0 0
chr3:73383570|73383785 hsa-miR-1247-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6765-5p 1 0 0
chr3:73383570|73383785 hsa-miR-671-5p 1 0 0
chr3:73383570|73383785 hsa-miR-7106-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6825-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6894-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1972 0 1 0
chr3:73383570|73383785 hsa-miR-6799-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6510-5p 1 1 0
chr3:73383570|73383785 hsa-miR-3692-5p 1 0 0
chr3:73383570|73383785 hsa-miR-139-3p 1 0 0
chr3:73383570|73383785 hsa-miR-3926 1 0 0
chr3:73383570|73383785 hsa-miR-6089 1 0 0
chr3:73383570|73383785 hsa-miR-6880-5p 1 1 0
chr3:73383570|73383785 hsa-miR-7847-3p 1 1 0
chr3:73383570|73383785 hsa-miR-4695-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4709-3p 1 0 0
chr3:73383570|73383785 hsa-miR-4753-5p 0 1 0
chr3:73383570|73383785 hsa-miR-6890-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6741-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4655-5p 1 0 0
chr3:73383570|73383785 hsa-miR-197-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3605-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3151-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1292-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3180-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6829-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6805-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6760-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6782-5p 1 0 0
chr3:73383570|73383785 hsa-miR-5008-5p 0 1 0
chr3:73383570|73383785 hsa-miR-5006-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6786-5p 1 0 0
chr3:73383570|73383785 hsa-miR-185-5p 1 0 0
chr3:73383570|73383785 hsa-miR-204-3p 1 0 0
chr3:73383570|73383785 hsa-miR-4640-5p 1 1 0
chr3:73383570|73383785 hsa-miR-885-3p 1 0 0
chr3:73383570|73383785 hsa-miR-4783-5p 1 1 0
chr3:73383570|73383785 hsa-miR-4787-5p 1 0 0
chr3:73383570|73383785 hsa-miR-425-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6824-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6789-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6802-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4746-3p 1 0 0
chr3:73383570|73383785 hsa-miR-7113-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6770-3p 1 0 0
chr3:73383570|73383785 hsa-miR-3200-5p 1 0 0
chr3:73383570|73383785 hsa-miR-2277-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3675-5p 0 1 0
chr3:73383570|73383785 hsa-miR-10400-5p 1 1 0
chr3:73383570|73383785 hsa-miR-4763-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6787-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6812-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6816-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1343-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3180 1 0 0
chr3:73383570|73383785 hsa-miR-6737-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6743-5p 1 1 0
chr3:73383570|73383785 hsa-miR-6815-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6819-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1249-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6797-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6879-5p 1 0 0
chr3:73383570|73383785 hsa-miR-7111-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4728-5p 0 1 0
chr3:73383570|73383785 hsa-miR-6780b-5p 1 0 0
chr3:73383570|73383785 hsa-miR-10396b-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1237-5p 1 0 0
chr3:73383570|73383785 hsa-miR-1909-3p 1 0 0
chr3:73383570|73383785 hsa-miR-4632-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4725-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6729-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6777-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6858-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3187-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4697-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4723-5p 1 0 0
chr3:73383570|73383785 hsa-miR-939-5p 1 0 0
chr3:73383570|73383785 hsa-miR-10394-3p 1 0 0
chr3:73383570|73383785 hsa-miR-6856-5p 1 0 0
chr3:73383570|73383785 hsa-miR-4664-5p 1 0 0
chr3:73383570|73383785 hsa-miR-3173-3p 0 1 0
chr3:73383570|73383785 hsa-miR-4646-5p 1 0 0
chr3:73383570|73383785 hsa-miR-6891-5p 0 1 0
chr3:73383570|73383785 hsa-miR-6750-5p 1 0 0
chr3:73383570|73383785 hsa-miR-342-5p 1 0 0
chr3:73383570|73383785 hsa-miR-499a-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr3:73383570|73383785
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LLCIMNSRRRRCSLAFTRCCFLSSLLQ
Nucleotide Sequence CTGCTCTGCATCATGAACTCGCGCCGCCGCCGCTGCTCCTTGGCCTTCACCAGGTGCTGCTTCCTCTCCTCCTTGCTCCAGTAG
CircID chr3:73383570|73383785
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MPLRSSRIFRARSRSRRSRTGLLVM
Nucleotide Sequence ATGCCGCTGCGCTCTTCCCGGATCTTCAGGGCGCGCTCCCGCAGCAGGCGGTCCCGCACGGGCCTCTTGGTGATGTAG
CircID chr3:73383570|73383785
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MHHELAPPPLLLGLHQVLLPLLLAPVAPHLHLAHRVVVGGHAAALFPDLQGALPQQAVPHGPLGDVARPV
Nucleotide Sequence CTGCATCATGAACTCGCGCCGCCGCCGCTGCTCCTTGGCCTTCACCAGGTGCTGCTTCCTCTCCTCCTTGCTCCAGTAGCGCCCCATCTTCATCTCGCTCACCGCGTCGTCGTCGGTGGTCATGCCGCTGCGCTCTTCCCGGATCTTCAGGGCGCGCTCCCGCAGCAGGCGGTCCCGCACGGGCCTCTTGGTGATGTAGCGCGTCCCGTC
CircID chr3:73383570|73383785
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MEQGGEEAAPGEGQGAAAAARVHDAEQ
Nucleotide Sequence CTGGAGCAAGGAGGAGAGGAAGCAGCACCTGGTGAAGGCCAAGGAGCAGCGGCGGCGGCGCGAGTTCATGATGCAGAGCAG
CircID chr3:73383570|73383785
ORF Type ORF5
Protein Length 57
Nucleotide Length 171
Protein Sequence MLRERALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQS
Nucleotide Sequence CTGCTGCGGGAGCGCGCCCTGAAGATCCGGGAAGAGCGCAGCGGCATGACCACCGACGACGACGCGGTGAGCGAGATGAAGATGGGGCGCTACTGGAGCAAGGAGGAGAGGAAGCAGCACCTGGTGAAGGCCAAGGAGCAGCGGCGGCGGCGCGAGTTCATGATGCAGAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab