CircRNA Information

General Information
circRNA Basic Information
CircID chr3:8981003|8981268
Strand -
CircType exon
Host Gene ENSG00000196220.14;
Algorism CIRI2;
Sequence AGCTTTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGACACTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTTGGACCTGACAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGACCCCAGAGAACCGGGGAAGTTGACATGAAATGTCAGCATTAGCT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:8981003|8981268 hsa-miR-22-5p 0 0 1
chr3:8981003|8981268 hsa-miR-22-3p 0 0 1
chr3:8981003|8981268 hsa-miR-320a-5p 0 0 1
chr3:8981003|8981268 hsa-miR-320a-3p 0 0 1
chr3:8981003|8981268 hsa-miR-155-5p 0 0 1
chr3:8981003|8981268 hsa-miR-155-3p 0 0 1
chr3:8981003|8981268 hsa-miR-376c-5p 0 0 1
chr3:8981003|8981268 hsa-miR-376c-3p 0 0 1
chr3:8981003|8981268 hsa-miR-370-5p 0 0 1
chr3:8981003|8981268 hsa-miR-370-3p 0 0 1
chr3:8981003|8981268 hsa-miR-326 0 1 1
chr3:8981003|8981268 hsa-miR-495-5p 0 0 1
chr3:8981003|8981268 hsa-miR-495-3p 0 0 1
chr3:8981003|8981268 hsa-miR-193b-5p 0 0 1
chr3:8981003|8981268 hsa-miR-193b-3p 0 0 1
chr3:8981003|8981268 hsa-miR-505-5p 0 0 1
chr3:8981003|8981268 hsa-miR-505-3p 0 0 1
chr3:8981003|8981268 hsa-miR-571 0 0 1
chr3:8981003|8981268 hsa-miR-588 0 1 1
chr3:8981003|8981268 hsa-miR-626 0 0 1
chr3:8981003|8981268 hsa-miR-637 0 0 1
chr3:8981003|8981268 hsa-miR-639 0 0 1
chr3:8981003|8981268 hsa-miR-653-5p 0 0 1
chr3:8981003|8981268 hsa-miR-653-3p 0 0 1
chr3:8981003|8981268 hsa-miR-543 0 0 1
chr3:8981003|8981268 hsa-miR-939-5p 0 0 1
chr3:8981003|8981268 hsa-miR-939-3p 0 0 1
chr3:8981003|8981268 hsa-miR-615-5p 0 0 1
chr3:8981003|8981268 hsa-miR-199a-5p 0 1 1
chr3:8981003|8981268 hsa-miR-671-3p 0 1 1
chr3:8981003|8981268 hsa-miR-628-5p 0 0 1
chr3:8981003|8981268 hsa-miR-199b-5p 0 1 1
chr3:8981003|8981268 hsa-miR-324-3p 0 0 1
chr3:8981003|8981268 hsa-miR-320b 0 0 1
chr3:8981003|8981268 hsa-miR-320c 0 0 1
chr3:8981003|8981268 hsa-miR-125a-5p 0 1 1
chr3:8981003|8981268 hsa-miR-330-5p 0 1 1
chr3:8981003|8981268 hsa-miR-320d 0 0 1
chr3:8981003|8981268 hsa-miR-193a-3p 0 1 1
chr3:8981003|8981268 hsa-miR-125b 0 0 1
chr3:8981003|8981268 hsa-miR-642 0 0 1
chr3:8981003|8981268 hsa-miR-514 0 0 1
chr3:8981003|8981268 hsa-miR-219-1-3p 0 0 1
chr3:8981003|8981268 hsa-miR-1976 1 0 0
chr3:8981003|8981268 hsa-miR-3154 0 1 0
chr3:8981003|8981268 hsa-miR-4290 1 1 0
chr3:8981003|8981268 hsa-miR-3921 0 1 0
chr3:8981003|8981268 hsa-miR-4449 1 0 0
chr3:8981003|8981268 hsa-miR-4515 0 1 0
chr3:8981003|8981268 hsa-miR-4537 0 1 0
chr3:8981003|8981268 hsa-miR-11399 0 1 0
chr3:8981003|8981268 hsa-miR-18a-3p 1 0 0
chr3:8981003|8981268 hsa-miR-15a-3p 1 0 0
chr3:8981003|8981268 hsa-miR-7155-5p 0 1 0
chr3:8981003|8981268 hsa-miR-3187-3p 0 1 0
chr3:8981003|8981268 hsa-miR-4728-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6845-3p 0 1 0
chr3:8981003|8981268 hsa-miR-4697-3p 1 1 0
chr3:8981003|8981268 hsa-miR-6827-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6882-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6740-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6763-3p 0 1 0
chr3:8981003|8981268 hsa-miR-3944-3p 1 0 0
chr3:8981003|8981268 hsa-miR-5001-3p 1 0 0
chr3:8981003|8981268 hsa-miR-3191-5p 0 1 0
chr3:8981003|8981268 hsa-miR-4717-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6501-5p 1 0 0
chr3:8981003|8981268 hsa-miR-7111-3p 0 1 0
chr3:8981003|8981268 hsa-miR-4667-3p 0 1 0
chr3:8981003|8981268 hsa-miR-378a-5p 1 0 0
chr3:8981003|8981268 hsa-miR-3120-5p 1 0 0
chr3:8981003|8981268 hsa-miR-7106-3p 1 0 0
chr3:8981003|8981268 hsa-miR-4687-5p 0 1 0
chr3:8981003|8981268 hsa-miR-4732-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6719-3p 0 1 0
chr3:8981003|8981268 hsa-miR-597-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6778-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6818-5p 0 1 0
chr3:8981003|8981268 hsa-miR-4529-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6886-3p 1 0 0
chr3:8981003|8981268 hsa-miR-328-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6851-3p 1 0 0
chr3:8981003|8981268 hsa-miR-670-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6780b-3p 0 1 0
chr3:8981003|8981268 hsa-miR-4727-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6733-3p 0 1 0
chr3:8981003|8981268 hsa-miR-514a-3p 0 1 0
chr3:8981003|8981268 hsa-miR-6813-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6797-5p 1 0 0
chr3:8981003|8981268 hsa-miR-4685-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6858-5p 1 0 0
chr3:8981003|8981268 hsa-miR-4723-5p 0 1 0
chr3:8981003|8981268 hsa-miR-365a-5p 0 1 0
chr3:8981003|8981268 hsa-miR-6791-3p 1 0 0
chr3:8981003|8981268 hsa-miR-10398-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6791-5p 1 0 0
chr3:8981003|8981268 hsa-miR-6893-3p 0 1 0
chr3:8981003|8981268 hsa-miR-3622a-3p 1 0 0
chr3:8981003|8981268 hsa-miR-6843-3p 0 1 0
chr3:8981003|8981268 hsa-miR-4653-5p 0 1 0
chr3:8981003|8981268 hsa-miR-514b-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:8981003|8981268
ORF Type ORF1
Protein Length 55
Nucleotide Length 168
Protein Sequence MADQSQGGQEGLDLTAKSLLSAPLGSFGYVGNVLCGCSEERRPQRTGEVDMKCQH
Nucleotide Sequence CTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTTGGACCTGACAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGACCCCAGAGAACCGGGGAAGTTGACATGAAATGTCAGCATTAG
CircID chr3:8981003|8981268
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MLLAGDNSHRKEVSTRGSDGHVASPRGTAGHWQINLREVRRAWT
Nucleotide Sequence TTGTTATTGGCCGGGGACAACTCACACAGAAAGGAGGTGTCAACAAGGGGCAGCGATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGACACTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTTGGACCTGA
CircID chr3:8981003|8981268
ORF Type ORF3
Protein Length 61
Nucleotide Length 186
Protein Sequence MAMWPVPEGQQDTGRSISGRSGGLGPDSKVPSLGSPGQLWICGECSMWLLRGEETPENRGS
Nucleotide Sequence ATGGCCATGTGGCCAGTCCCAGAGGGACAGCAGGACACTGGCAGATCAATCTCAGGGAGGTCAGGAGGGCTTGGACCTGACAGCAAAGTCCCTTCTCTCGGCTCCCCTGGGCAGCTTTGGATATGTGGGGAATGTTCTATGTGGCTGCTCAGAGGAGAGGAGACCCCAGAGAACCGGGGAAGTTGA
CircID chr3:8981003|8981268
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MSTSPVLWGLLSSEQPHRTFPTYPKLPRGAERRDFAVRSKPS
Nucleotide Sequence ATGTCAACTTCCCCGGTTCTCTGGGGTCTCCTCTCCTCTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTGTCAGGTCCAAGCCCTCCTGA
CircID chr3:8981003|8981268
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MLSLWDWPHGHRCPLLTPPFCVSCPRPITK
Nucleotide Sequence CTGCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAG
CircID chr3:8981003|8981268
ORF Type ORF6
Protein Length 55
Nucleotide Length 168
Protein Sequence MSSHIEHSPHIQSCPGEPREGTLLSGPSPPDLPEIDLPVSCCPSGTGHMAIAAPC
Nucleotide Sequence CTGAGCAGCCACATAGAACATTCCCCACATATCCAAAGCTGCCCAGGGGAGCCGAGAGAAGGGACTTTGCTGTCAGGTCCAAGCCCTCCTGACCTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGA
CircID chr3:8981003|8981268
ORF Type ORF7
Protein Length 41
Nucleotide Length 123
Protein Sequence MTSLRLICQCPAVPLGLATWPSLPLVDTSFLCELSPANNKA
Nucleotide Sequence CTGACCTCCCTGAGATTGATCTGCCAGTGTCCTGCTGTCCCTCTGGGACTGGCCACATGGCCATCGCTGCCCCTTGTTGACACCTCCTTTCTGTGTGAGTTGTCCCCGGCCAATAACAAAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab