CircRNA Information

General Information
circRNA Basic Information
CircID chr3:9688699|9689082
Strand +
CircType exon
Host Gene ENSG00000163719.17;
Algorism CIRI2;
Sequence CAAGCTGCCTGAGTTGGCGCTCCTGCTGGGACCAGCTCCACGGCCTCATAGGTGAAGCTCCCAGTGGCTCCTGGGGAACTCTCCATGACCAGGGAGAAGTCGCTGCCAAGGCTGGTGGTGCTGCCACGGTCCTTTCGTCCTAAAAGAAGCCAGTGCCATCAGTCAGCGTGTTACCTTCTCCCACTACTGGTCCCCCACCTTTTCTATACCACATAACTGGGAAGAAAAAAAAAAAAACAAAAAACCTCTTAGCACAAACAGTTCCTGCCTGATCTGTACACGGGAAGATGTATGGAGGAAGGGAAGTCTGTTGGGGCCCAGGACTCACTCAGCATGCAGATGTCTTCCAGGGTGAAGCCTCCATCCCGGGCTGGCAAACTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:9688699|9689082 hsa-miR-29a-5p 0 0 1
chr3:9688699|9689082 hsa-miR-29a-3p 0 0 1
chr3:9688699|9689082 hsa-miR-183-5p 0 0 1
chr3:9688699|9689082 hsa-miR-183-3p 0 0 1
chr3:9688699|9689082 hsa-miR-204-5p 0 0 1
chr3:9688699|9689082 hsa-miR-204-3p 0 0 1
chr3:9688699|9689082 hsa-miR-211-5p 0 0 1
chr3:9688699|9689082 hsa-miR-211-3p 0 0 1
chr3:9688699|9689082 hsa-miR-214-5p 0 0 1
chr3:9688699|9689082 hsa-miR-214-3p 0 0 1
chr3:9688699|9689082 hsa-miR-185-5p 0 0 1
chr3:9688699|9689082 hsa-miR-185-3p 0 0 1
chr3:9688699|9689082 hsa-miR-29c-5p 0 0 1
chr3:9688699|9689082 hsa-miR-29c-3p 0 0 1
chr3:9688699|9689082 hsa-miR-452-5p 0 0 1
chr3:9688699|9689082 hsa-miR-452-3p 0 0 1
chr3:9688699|9689082 hsa-miR-412-5p 0 0 1
chr3:9688699|9689082 hsa-miR-412-3p 0 0 1
chr3:9688699|9689082 hsa-miR-510-5p 0 0 1
chr3:9688699|9689082 hsa-miR-510-3p 0 0 1
chr3:9688699|9689082 hsa-miR-617 0 0 1
chr3:9688699|9689082 hsa-miR-623 0 0 1
chr3:9688699|9689082 hsa-miR-625-5p 0 0 1
chr3:9688699|9689082 hsa-miR-625-3p 0 0 1
chr3:9688699|9689082 hsa-miR-641 0 0 1
chr3:9688699|9689082 hsa-miR-650 0 0 1
chr3:9688699|9689082 hsa-miR-651-5p 0 0 1
chr3:9688699|9689082 hsa-miR-651-3p 0 0 1
chr3:9688699|9689082 hsa-miR-892b 0 1 1
chr3:9688699|9689082 hsa-miR-665 0 0 1
chr3:9688699|9689082 hsa-miR-873-5p 0 0 1
chr3:9688699|9689082 hsa-miR-873-3p 0 0 1
chr3:9688699|9689082 hsa-miR-920 0 0 1
chr3:9688699|9689082 hsa-miR-940 0 0 1
chr3:9688699|9689082 hsa-miR-1226-5p 0 0 1
chr3:9688699|9689082 hsa-miR-1226-3p 0 0 1
chr3:9688699|9689082 hsa-miR-1202 1 1 1
chr3:9688699|9689082 hsa-miR-1275 0 0 1
chr3:9688699|9689082 hsa-miR-129-5p 0 0 1
chr3:9688699|9689082 hsa-miR-296-5p 0 0 1
chr3:9688699|9689082 hsa-miR-885-3p 0 0 1
chr3:9688699|9689082 hsa-miR-299-3p 0 0 1
chr3:9688699|9689082 hsa-miR-339-3p 0 0 1
chr3:9688699|9689082 hsa-miR-490-5p 0 0 1
chr3:9688699|9689082 hsa-miR-199b-3p 0 0 1
chr3:9688699|9689082 hsa-miR-199a-3p 0 0 1
chr3:9688699|9689082 hsa-miR-220b 0 0 1
chr3:9688699|9689082 hsa-miR-7 0 0 1
chr3:9688699|9689082 hsa-miR-218 0 0 1
chr3:9688699|9689082 hsa-miR-29b 0 0 1
chr3:9688699|9689082 hsa-miR-326 1 0 0
chr3:9688699|9689082 hsa-miR-612 1 0 0
chr3:9688699|9689082 hsa-miR-761 0 1 0
chr3:9688699|9689082 hsa-miR-936 1 0 0
chr3:9688699|9689082 hsa-miR-1538 1 0 0
chr3:9688699|9689082 hsa-miR-3122 0 1 0
chr3:9688699|9689082 hsa-miR-3188 0 1 0
chr3:9688699|9689082 hsa-miR-4439 0 1 0
chr3:9688699|9689082 hsa-miR-4466 1 0 0
chr3:9688699|9689082 hsa-miR-4514 0 1 0
chr3:9688699|9689082 hsa-miR-4525 1 0 0
chr3:9688699|9689082 hsa-miR-4530 0 1 0
chr3:9688699|9689082 hsa-miR-3972 1 1 0
chr3:9688699|9689082 hsa-miR-4734 1 0 0
chr3:9688699|9689082 hsa-miR-5192 0 1 0
chr3:9688699|9689082 hsa-miR-5698 1 0 0
chr3:9688699|9689082 hsa-miR-6124 1 0 0
chr3:9688699|9689082 hsa-miR-6131 0 1 0
chr3:9688699|9689082 hsa-miR-548ba 0 1 0
chr3:9688699|9689082 hsa-miR-8077 1 1 0
chr3:9688699|9689082 hsa-miR-1843 0 1 0
chr3:9688699|9689082 hsa-miR-12115 1 0 0
chr3:9688699|9689082 hsa-miR-12116 0 1 0
chr3:9688699|9689082 hsa-miR-103a-2-5p 1 0 0
chr3:9688699|9689082 hsa-miR-141-5p 0 1 0
chr3:9688699|9689082 hsa-miR-150-3p 1 0 0
chr3:9688699|9689082 hsa-miR-4433b-3p 1 0 0
chr3:9688699|9689082 hsa-miR-93-3p 1 0 0
chr3:9688699|9689082 hsa-miR-7-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6840-3p 0 1 0
chr3:9688699|9689082 hsa-miR-4433a-3p 1 0 0
chr3:9688699|9689082 hsa-miR-212-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6720-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6728-5p 1 0 0
chr3:9688699|9689082 hsa-miR-1227-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6089 1 1 0
chr3:9688699|9689082 hsa-miR-3192-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6880-5p 1 0 0
chr3:9688699|9689082 hsa-miR-7847-3p 1 0 0
chr3:9688699|9689082 hsa-miR-4722-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6730-5p 1 0 0
chr3:9688699|9689082 hsa-miR-7160-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6721-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6849-3p 0 1 0
chr3:9688699|9689082 hsa-miR-4728-3p 1 1 0
chr3:9688699|9689082 hsa-miR-3151-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6770-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6874-5p 1 1 0
chr3:9688699|9689082 hsa-miR-3194-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6821-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6858-3p 1 0 0
chr3:9688699|9689082 hsa-miR-1343-3p 0 1 0
chr3:9688699|9689082 hsa-miR-6786-5p 1 0 0
chr3:9688699|9689082 hsa-miR-939-3p 1 1 0
chr3:9688699|9689082 hsa-miR-4640-5p 1 0 0
chr3:9688699|9689082 hsa-miR-30c-2-3p 0 1 0
chr3:9688699|9689082 hsa-miR-3667-3p 0 1 0
chr3:9688699|9689082 hsa-miR-4787-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6802-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6878-5p 0 1 0
chr3:9688699|9689082 hsa-miR-4776-5p 1 0 0
chr3:9688699|9689082 hsa-miR-3065-3p 0 1 0
chr3:9688699|9689082 hsa-miR-490-3p 1 0 0
chr3:9688699|9689082 hsa-miR-6869-5p 1 0 0
chr3:9688699|9689082 hsa-miR-7152-3p 1 1 0
chr3:9688699|9689082 hsa-miR-4778-3p 0 1 0
chr3:9688699|9689082 hsa-miR-4727-3p 0 1 0
chr3:9688699|9689082 hsa-miR-7112-3p 0 1 0
chr3:9688699|9689082 hsa-miR-1288-5p 0 1 0
chr3:9688699|9689082 hsa-miR-1296-5p 1 0 0
chr3:9688699|9689082 hsa-miR-2355-5p 0 1 0
chr3:9688699|9689082 hsa-miR-2277-5p 1 0 0
chr3:9688699|9689082 hsa-miR-3177-5p 0 1 0
chr3:9688699|9689082 hsa-miR-5699-5p 0 1 0
chr3:9688699|9689082 hsa-miR-4772-5p 0 1 0
chr3:9688699|9689082 hsa-miR-4802-5p 0 1 0
chr3:9688699|9689082 hsa-miR-10400-5p 1 0 0
chr3:9688699|9689082 hsa-miR-1207-5p 1 0 0
chr3:9688699|9689082 hsa-miR-1233-5p 0 1 0
chr3:9688699|9689082 hsa-miR-4763-3p 1 1 0
chr3:9688699|9689082 hsa-miR-6769b-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6778-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6787-5p 1 0 0
chr3:9688699|9689082 hsa-miR-5001-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6726-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6756-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6803-5p 1 0 0
chr3:9688699|9689082 hsa-miR-10401-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6751-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6788-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6879-5p 1 0 0
chr3:9688699|9689082 hsa-miR-7111-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6754-3p 0 1 0
chr3:9688699|9689082 hsa-miR-328-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6794-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6795-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6887-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6885-5p 1 0 0
chr3:9688699|9689082 hsa-miR-939-5p 1 0 0
chr3:9688699|9689082 hsa-miR-30c-1-3p 0 1 0
chr3:9688699|9689082 hsa-miR-4665-5p 1 1 0
chr3:9688699|9689082 hsa-miR-6891-5p 1 0 0
chr3:9688699|9689082 hsa-miR-5591-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6724-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6791-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6762-5p 1 0 0
chr3:9688699|9689082 hsa-miR-6792-3p 0 1 0
chr3:9688699|9689082 hsa-miR-6783-3p 1 1 0
chr3:9688699|9689082 hsa-miR-3619-5p 0 1 0
chr3:9688699|9689082 hsa-miR-5006-3p 0 1 0
chr3:9688699|9689082 hsa-miR-103a-1-5p 1 0 0
chr3:9688699|9689082 hsa-miR-3129-5p 0 1 0
chr3:9688699|9689082 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:9688699|9689082
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MTREKSLPRLVVLPRSFRPKRSQCHQSACYLLPLLVPHLFYTT
Nucleotide Sequence ATGACCAGGGAGAAGTCGCTGCCAAGGCTGGTGGTGCTGCCACGGTCCTTTCGTCCTAAAAGAAGCCAGTGCCATCAGTCAGCGTGTTACCTTCTCCCACTACTGGTCCCCCACCTTTTCTATACCACATAA
CircID chr3:9688699|9689082
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MPDLYTGRCMEEGKSVGAQDSLSMQMSSRVKPPSRAGKLF
Nucleotide Sequence CTGCCTGATCTGTACACGGGAAGATGTATGGAGGAAGGGAAGTCTGTTGGGGCCCAGGACTCACTCAGCATGCAGATGTCTTCCAGGGTGAAGCCTCCATCCCGGGCTGGCAAACTCTTC
CircID chr3:9688699|9689082
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MICTREDVWRKGSLLGPRTHSACRCLPG
Nucleotide Sequence CTGATCTGTACACGGGAAGATGTATGGAGGAAGGGAAGTCTGTTGGGGCCCAGGACTCACTCAGCATGCAGATGTCTTCCAGGGTGA
CircID chr3:9688699|9689082
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MSWRSCWDQLHGLIGEAPSGSWGTLHDQGEVAAKAGGAATVLSS
Nucleotide Sequence CTGAGTTGGCGCTCCTGCTGGGACCAGCTCCACGGCCTCATAGGTGAAGCTCCCAGTGGCTCCTGGGGAACTCTCCATGACCAGGGAGAAGTCGCTGCCAAGGCTGGTGGTGCTGCCACGGTCCTTTCGTCCTAA
CircID chr3:9688699|9689082
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MYGGREVCWGPGLTQHADVFQGEASIPGWQTL
Nucleotide Sequence ATGTATGGAGGAAGGGAAGTCTGTTGGGGCCCAGGACTCACTCAGCATGCAGATGTCTTCCAGGGTGAAGCCTCCATCCCGGGCTGGCAAACTCTT
CircID chr3:9688699|9689082
ORF Type ORF6
Protein Length 45
Nucleotide Length 138
Protein Sequence MGPNRLPFLHTSSRVQIRQELFVLRGFLFFFFSSQLCGIEKVGDQ
Nucleotide Sequence CTGGGCCCCAACAGACTTCCCTTCCTCCATACATCTTCCCGTGTACAGATCAGGCAGGAACTGTTTGTGCTAAGAGGTTTTTTGTTTTTTTTTTTTTCTTCCCAGTTATGTGGTATAGAAAAGGTGGGGGACCAGTAG
CircID chr3:9688699|9689082
ORF Type ORF7
Protein Length 38
Nucleotide Length 117
Protein Sequence MMALASFRTKGPWQHHQPWQRLLPGHGEFPRSHWELHL
Nucleotide Sequence CTGATGGCACTGGCTTCTTTTAGGACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCACCTATGA
CircID chr3:9688699|9689082
ORF Type ORF8
Protein Length 42
Nucleotide Length 129
Protein Sequence MPARDGGFTLEDICMLSESWAPTDFPSSIHLPVYRSGRNCLC
Nucleotide Sequence TTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGTGAGTCCTGGGCCCCAACAGACTTCCCTTCCTCCATACATCTTCCCGTGTACAGATCAGGCAGGAACTGTTTGTGCTAA
CircID chr3:9688699|9689082
ORF Type ORF9
Protein Length 30
Nucleotide Length 90
Protein Sequence MVMESSPGATGSFTYEAVELVPAGAPTQAA
Nucleotide Sequence CTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCT
CircID chr3:9688699|9689082
ORF Type ORF10
Protein Length 36
Nucleotide Length 108
Protein Sequence MAATSPWSWRVPQEPLGASPMRPWSWSQQERQLRQL
Nucleotide Sequence TTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab