CircRNA Information

General Information
circRNA Basic Information
CircID chr3:9780214|9780421
Strand -
CircType exon
Host Gene ENSG00000171148.12;
Algorism CIRI2;
Sequence CTCAGGGGAAGGGCCACGGCCCTCTAGAGACTGCCGCCATTTGAGGGACAGCCACAGGCCAATGTTTCCTGTGCCCAAAGAAGGAAGTGGGCCTCCCTTCCCCTCCCCTAGGCCAGATAATCAGCCTGAGGCAGGGGTGAGGGCTACCCATCCAGCAGCTTCAGGATGCTCTCACGCTCCTTCAGAGTCTTCCAGGCCTGGTCCTTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:9780214|9780421 hsa-miR-328-5p 0 0 1
chr3:9780214|9780421 hsa-miR-328-3p 0 0 1
chr3:9780214|9780421 hsa-miR-484 0 0 1
chr3:9780214|9780421 hsa-miR-494-5p 0 0 1
chr3:9780214|9780421 hsa-miR-494-3p 0 0 1
chr3:9780214|9780421 hsa-miR-1237-5p 0 0 1
chr3:9780214|9780421 hsa-miR-1237-3p 0 0 1
chr3:9780214|9780421 hsa-miR-663b 0 1 1
chr3:9780214|9780421 hsa-miR-1204 0 1 1
chr3:9780214|9780421 hsa-miR-1287-5p 0 0 1
chr3:9780214|9780421 hsa-miR-1287-3p 0 0 1
chr3:9780214|9780421 hsa-miR-1291 0 0 1
chr3:9780214|9780421 hsa-miR-1248 0 1 1
chr3:9780214|9780421 hsa-miR-1251-5p 0 0 1
chr3:9780214|9780421 hsa-miR-1251-3p 0 0 1
chr3:9780214|9780421 hsa-miR-1252-5p 0 0 1
chr3:9780214|9780421 hsa-miR-1252-3p 0 0 1
chr3:9780214|9780421 hsa-miR-1321 0 0 1
chr3:9780214|9780421 hsa-miR-127-5p 0 0 1
chr3:9780214|9780421 hsa-miR-331-3p 0 0 1
chr3:9780214|9780421 hsa-miR-518d-5p 0 1 1
chr3:9780214|9780421 hsa-miR-519b-5p 0 1 1
chr3:9780214|9780421 hsa-miR-519c-5p 0 1 1
chr3:9780214|9780421 hsa-miR-520c-5p 0 1 1
chr3:9780214|9780421 hsa-miR-125a-5p 0 0 1
chr3:9780214|9780421 hsa-miR-105 0 0 1
chr3:9780214|9780421 hsa-miR-125b 0 0 1
chr3:9780214|9780421 hsa-miR-7 0 0 1
chr3:9780214|9780421 hsa-miR-9 0 0 1
chr3:9780214|9780421 hsa-miR-1254 0 0 1
chr3:9780214|9780421 hsa-miR-129-3p 0 0 1
chr3:9780214|9780421 hsa-miR-526a 0 0 1
chr3:9780214|9780421 hsa-miR-635 0 1 0
chr3:9780214|9780421 hsa-miR-760 1 0 0
chr3:9780214|9780421 hsa-miR-3176 0 1 0
chr3:9780214|9780421 hsa-miR-3196 1 0 0
chr3:9780214|9780421 hsa-miR-4432 0 1 0
chr3:9780214|9780421 hsa-miR-4467 1 0 0
chr3:9780214|9780421 hsa-miR-4656 1 0 0
chr3:9780214|9780421 hsa-miR-4658 1 0 0
chr3:9780214|9780421 hsa-miR-4741 1 0 0
chr3:9780214|9780421 hsa-miR-7974 0 1 0
chr3:9780214|9780421 hsa-miR-132-5p 0 1 0
chr3:9780214|9780421 hsa-miR-4687-3p 1 0 0
chr3:9780214|9780421 hsa-miR-7154-3p 1 0 0
chr3:9780214|9780421 hsa-miR-4474-3p 0 1 0
chr3:9780214|9780421 hsa-miR-1224-5p 1 0 0
chr3:9780214|9780421 hsa-miR-5008-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6735-3p 1 1 0
chr3:9780214|9780421 hsa-miR-1226-5p 1 1 0
chr3:9780214|9780421 hsa-miR-6853-5p 1 1 0
chr3:9780214|9780421 hsa-miR-889-5p 0 1 0
chr3:9780214|9780421 hsa-miR-6749-5p 1 1 0
chr3:9780214|9780421 hsa-miR-3202 0 1 0
chr3:9780214|9780421 hsa-miR-149-3p 0 1 0
chr3:9780214|9780421 hsa-miR-6824-5p 1 1 0
chr3:9780214|9780421 hsa-miR-4776-5p 1 0 0
chr3:9780214|9780421 hsa-miR-4646-3p 1 0 0
chr3:9780214|9780421 hsa-miR-6811-3p 1 1 0
chr3:9780214|9780421 hsa-miR-4687-5p 0 1 0
chr3:9780214|9780421 hsa-miR-1911-3p 0 1 0
chr3:9780214|9780421 hsa-miR-3619-3p 1 0 0
chr3:9780214|9780421 hsa-miR-6895-3p 1 0 0
chr3:9780214|9780421 hsa-miR-6770-3p 0 1 0
chr3:9780214|9780421 hsa-miR-6802-3p 0 1 0
chr3:9780214|9780421 hsa-miR-372-5p 0 1 0
chr3:9780214|9780421 hsa-miR-10400-5p 1 0 0
chr3:9780214|9780421 hsa-miR-1233-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6787-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6865-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6756-5p 1 0 0
chr3:9780214|9780421 hsa-miR-7107-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6779-5p 1 0 0
chr3:9780214|9780421 hsa-miR-7111-5p 1 0 0
chr3:9780214|9780421 hsa-miR-6754-3p 0 1 0
chr3:9780214|9780421 hsa-miR-4728-5p 1 1 0
chr3:9780214|9780421 hsa-miR-5189-5p 1 0 0
chr3:9780214|9780421 hsa-miR-4726-5p 1 0 0
chr3:9780214|9780421 hsa-miR-3116 0 1 0
chr3:9780214|9780421 hsa-miR-4747-5p 0 1 0
chr3:9780214|9780421 hsa-miR-6753-3p 1 0 0
chr3:9780214|9780421 hsa-miR-518e-5p 0 1 0
chr3:9780214|9780421 hsa-miR-518f-5p 0 1 0
chr3:9780214|9780421 hsa-miR-519a-5p 0 1 0
chr3:9780214|9780421 hsa-miR-522-5p 0 1 0
chr3:9780214|9780421 hsa-miR-523-5p 0 1 0
chr3:9780214|9780421 hsa-miR-526a-5p 0 1 0
chr3:9780214|9780421 hsa-miR-6862-3p 0 1 0
chr3:9780214|9780421 hsa-miR-6801-3p 0 1 0
chr3:9780214|9780421 hsa-miR-4756-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:9780214|9780421
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MPPFEGQPQANVSCAQRRKWASLPLP
Nucleotide Sequence CTGCCGCCATTTGAGGGACAGCCACAGGCCAATGTTTCCTGTGCCCAAAGAAGGAAGTGGGCCTCCCTTCCCCTCCCCTAG

CircID chr3:9780214|9780421
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MRDSHRPMFPVPKEGSGPPFPSPRPDNQPEAGVRATHPAASGCSHAPSESSRPGPF
Nucleotide Sequence TTGAGGGACAGCCACAGGCCAATGTTTCCTGTGCCCAAAGAAGGAAGTGGGCCTCCCTTCCCCTCCCCTAGGCCAGATAATCAGCCTGAGGCAGGGGTGAGGGCTACCCATCCAGCAGCTTCAGGATGCTCTCACGCTCCTTCAGAGTCTTCCAGGCCTGGTCCTTTT

CircID chr3:9780214|9780421
ORF Type ORF3
Protein Length 49
Nucleotide Length 150
Protein Sequence MGSPHPCLRLIIWPRGGEGRPTSFFGHRKHWPVAVPQMAAVSRGPWPFP
Nucleotide Sequence ATGGGTAGCCCTCACCCCTGCCTCAGGCTGATTATCTGGCCTAGGGGAGGGGAAGGGAGGCCCACTTCCTTCTTTGGGCACAGGAAACATTGGCCTGTGGCTGTCCCTCAAATGGCGGCAGTCTCTAGAGGGCCGTGGCCCTTCCCCTGA

CircID chr3:9780214|9780421
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MGTGNIGLWLSLKWRQSLEGRGPSPE
Nucleotide Sequence TTGGGCACAGGAAACATTGGCCTGTGGCTGTCCCTCAAATGGCGGCAGTCTCTAGAGGGCCGTGGCCCTTCCCCTGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites