CircNet

General Information

circRNA Basic Information

CircID	chr4:106193609\|106194754
Strand	-
CircType	exon
Host Gene	ENSG00000145348.16;
Algorism	find_circ;CIRI2;CIRC
Sequence	CTCTATGCCATCCCTTGGTTTCTTACCATGTTTACTCATGTATTTCCACTACACAAAATTTTCCACCTCTGGGATACCTTACTACTTGGGAATTCCTCTTTCCCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCGGCTTTTGGCTAATGGCTTTAATGAGTGTATTCTTCTCTTCTCCGATTTACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:106193609\|106194754	hsa-miR-29b-2-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:106193609\|106194754
ORF Type	ORF1
Protein Length	57
Nucleotide Length	171
Protein Sequence	MFTHVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRLLANGFNECILLFSDLP
Nucleotide Sequence	ATGTTTACTCATGTATTTCCACTACACAAAATTTTCCACCTCTGGGATACCTTACTACTTGGGAATTCCTCTTTCCCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCGGCTTTTGGCTAATGGCTTTAATGAGTGTATTCTTCTCTTCTCCGATTTACCA

CircID	chr4:106193609\|106194754
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MPSLGFLPCLLMYFHYTKFSTSGIPYYLGIPLSHSVLE*
Nucleotide Sequence	ATGCCATCCCTTGGTTTCTTACCATGTTTACTCATGTATTTCCACTACACAAAATTTTCCACCTCTGGGATACCTTACTACTTGGGAATTCCTCTTTCCCATTCTGTATTGGAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:106193609\|106194754	MOV10	0	1	1
chr4:106193609\|106194754	TAF15	0	1	0
chr4:106193609\|106194754	CELF2	1	0	0
chr4:106193609\|106194754	CNBP	1	0	0
chr4:106193609\|106194754	UPF1	0	2	0
chr4:106193609\|106194754	TNRC6A	3	0	0
chr4:106193609\|106194754	SRSF1	0	0	1
chr4:106193609\|106194754	NOP58	0	0	1
chr4:106193609\|106194754	U2AF1	4	0	1
chr4:106193609\|106194754	U2AF2	7	0	2
chr4:106193609\|106194754	DDX54	0	0	2
chr4:106193609\|106194754	PCBP2	2	0	0
chr4:106193609\|106194754	HNRNPL	3	0	0
chr4:106193609\|106194754	MBNL2	1	0	0
chr4:106193609\|106194754	HNRNPC	0	1	0
chr4:106193609\|106194754	LARP7	1	0	0
chr4:106193609\|106194754	SMNDC1	1	0	0
chr4:106193609\|106194754	HNRNPA1	2	2	0
chr4:106193609\|106194754	IGF2BP1	0	1	0
chr4:106193609\|106194754	IGF2BP3	0	0	2
chr4:106193609\|106194754	IGF2BP2	3	0	8
chr4:106193609\|106194754	PTBP1	1	1	2
chr4:106193609\|106194754	TARDBP	1	1	0
chr4:106193609\|106194754	GTF2F1	3	0	0
chr4:106193609\|106194754	PRPF8	0	1	0
chr4:106193609\|106194754	CSTF2T	0	2	0
chr4:106193609\|106194754	EIF4A3	0	1	2
chr4:106193609\|106194754	FBL	1	0	1

CircRNA Information