CircRNA Information

General Information
circRNA Basic Information
CircID chr4:107911763|107912000
Strand +
CircType exon
Host Gene ENSG00000164023.13;
Algorism CIRI2;
Sequence CCGCATTGGCCTCTCCACCCTCTGCCCCAGTGTTGATAACTTTGCAACCTTAAAACTTTTCTAAGGTTTTAAAAGTCTTGCAAATTAACCTTCAAGTAGCTAAGAAATTAAGCCAAGAATTATCCAAAAGATCCAATAGCATTAAATAATGCACTAAATCTGGTAACATTAAATCTGATCAGATTTTTTAATCCATTTTTTGGCATCACCTTAAAGAAATTTAGAAACAGTTATCCCC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:107911763|107912000 hsa-miR-18a-5p 0 0 1
chr4:107911763|107912000 hsa-miR-18a-3p 0 0 1
chr4:107911763|107912000 hsa-miR-130a-5p 0 0 1
chr4:107911763|107912000 hsa-miR-130a-3p 0 0 1
chr4:107911763|107912000 hsa-miR-141-5p 0 0 1
chr4:107911763|107912000 hsa-miR-141-3p 0 0 1
chr4:107911763|107912000 hsa-miR-185-5p 0 0 1
chr4:107911763|107912000 hsa-miR-185-3p 0 0 1
chr4:107911763|107912000 hsa-miR-155-5p 0 0 1
chr4:107911763|107912000 hsa-miR-155-3p 0 0 1
chr4:107911763|107912000 hsa-miR-200a-5p 0 0 1
chr4:107911763|107912000 hsa-miR-200a-3p 0 0 1
chr4:107911763|107912000 hsa-miR-301a-5p 0 0 1
chr4:107911763|107912000 hsa-miR-301a-3p 0 0 1
chr4:107911763|107912000 hsa-miR-130b-5p 0 0 1
chr4:107911763|107912000 hsa-miR-130b-3p 0 0 1
chr4:107911763|107912000 hsa-miR-383-5p 0 0 1
chr4:107911763|107912000 hsa-miR-383-3p 0 0 1
chr4:107911763|107912000 hsa-miR-18b-5p 0 0 1
chr4:107911763|107912000 hsa-miR-18b-3p 0 0 1
chr4:107911763|107912000 hsa-miR-452-5p 0 0 1
chr4:107911763|107912000 hsa-miR-452-3p 0 0 1
chr4:107911763|107912000 hsa-miR-493-5p 0 0 1
chr4:107911763|107912000 hsa-miR-493-3p 0 0 1
chr4:107911763|107912000 hsa-miR-527 0 0 1
chr4:107911763|107912000 hsa-miR-561-5p 0 0 1
chr4:107911763|107912000 hsa-miR-561-3p 0 0 1
chr4:107911763|107912000 hsa-miR-454-5p 0 0 1
chr4:107911763|107912000 hsa-miR-454-3p 0 0 1
chr4:107911763|107912000 hsa-miR-301b-5p 0 0 1
chr4:107911763|107912000 hsa-miR-301b-3p 0 0 1
chr4:107911763|107912000 hsa-miR-1246 0 0 1
chr4:107911763|107912000 hsa-miR-1261 0 1 1
chr4:107911763|107912000 hsa-miR-486-3p 0 0 1
chr4:107911763|107912000 hsa-miR-576-5p 0 0 1
chr4:107911763|107912000 hsa-miR-409-3p 0 0 1
chr4:107911763|107912000 hsa-miR-513a-3p 0 0 1
chr4:107911763|107912000 hsa-miR-518a-5p 0 0 1
chr4:107911763|107912000 hsa-miR-450b-5p 0 0 1
chr4:107911763|107912000 hsa-miR-548c-3p 0 0 1
chr4:107911763|107912000 hsa-miR-638 1 0 0
chr4:107911763|107912000 hsa-miR-658 1 0 0
chr4:107911763|107912000 hsa-miR-762 1 0 0
chr4:107911763|107912000 hsa-miR-1275 1 0 0
chr4:107911763|107912000 hsa-miR-3132 1 0 0
chr4:107911763|107912000 hsa-miR-3196 1 0 0
chr4:107911763|107912000 hsa-miR-4298 1 0 0
chr4:107911763|107912000 hsa-miR-4260 1 0 0
chr4:107911763|107912000 hsa-miR-4271 1 0 0
chr4:107911763|107912000 hsa-miR-3936 1 0 0
chr4:107911763|107912000 hsa-miR-3945 1 0 0
chr4:107911763|107912000 hsa-miR-4429 1 0 0
chr4:107911763|107912000 hsa-miR-4463 1 0 0
chr4:107911763|107912000 hsa-miR-4656 1 0 0
chr4:107911763|107912000 hsa-miR-4688 1 0 0
chr4:107911763|107912000 hsa-miR-5090 1 1 0
chr4:107911763|107912000 hsa-miR-5192 1 0 0
chr4:107911763|107912000 hsa-miR-5787 1 0 0
chr4:107911763|107912000 hsa-miR-6086 1 0 0
chr4:107911763|107912000 hsa-miR-6133 1 0 0
chr4:107911763|107912000 hsa-miR-7150 1 0 0
chr4:107911763|107912000 hsa-miR-8072 1 0 0
chr4:107911763|107912000 hsa-miR-8089 1 0 0
chr4:107911763|107912000 hsa-miR-6765-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6894-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6510-5p 1 0 0
chr4:107911763|107912000 hsa-miR-1227-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6873-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6890-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6820-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6727-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6721-5p 1 0 0
chr4:107911763|107912000 hsa-miR-197-5p 1 0 0
chr4:107911763|107912000 hsa-miR-3151-5p 1 0 0
chr4:107911763|107912000 hsa-miR-3180-3p 1 0 0
chr4:107911763|107912000 hsa-miR-6748-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6732-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6798-5p 1 0 0
chr4:107911763|107912000 hsa-miR-2467-3p 1 1 0
chr4:107911763|107912000 hsa-miR-6782-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6786-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6835-5p 1 0 0
chr4:107911763|107912000 hsa-miR-885-3p 1 0 0
chr4:107911763|107912000 hsa-miR-6847-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4787-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6781-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4750-5p 1 0 0
chr4:107911763|107912000 hsa-miR-7159-5p 1 0 0
chr4:107911763|107912000 hsa-miR-1207-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4763-3p 1 0 0
chr4:107911763|107912000 hsa-miR-6769b-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6816-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6870-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6775-5p 0 1 0
chr4:107911763|107912000 hsa-miR-3180 1 0 0
chr4:107911763|107912000 hsa-miR-6737-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6743-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6752-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6803-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6819-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6842-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6851-5p 1 0 0
chr4:107911763|107912000 hsa-miR-1249-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6722-3p 1 1 0
chr4:107911763|107912000 hsa-miR-6751-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6774-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6808-5p 1 0 0
chr4:107911763|107912000 hsa-miR-7111-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4728-5p 1 0 0
chr4:107911763|107912000 hsa-miR-5196-5p 1 0 0
chr4:107911763|107912000 hsa-miR-1237-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4726-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6735-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6883-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6831-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4700-5p 1 0 0
chr4:107911763|107912000 hsa-miR-4667-5p 1 0 0
chr4:107911763|107912000 hsa-miR-6791-5p 1 0 0
chr4:107911763|107912000 hsa-miR-769-3p 1 0 0
chr4:107911763|107912000 hsa-miR-320a-3p 1 0 0
chr4:107911763|107912000 hsa-miR-320b 1 0 0
chr4:107911763|107912000 hsa-miR-320c 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:107911763|107912000
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MVTLNLIRFFNPFFGITLKKFRNSYP
Nucleotide Sequence CTGGTAACATTAAATCTGATCAGATTTTTTAATCCATTTTTTGGCATCACCTTAAAGAAATTTAGAAACAGTTATCCC
CircID chr4:107911763|107912000
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MLPDLVHYLMLLDLLDNSWLNFLAT
Nucleotide Sequence ATGTTACCAGATTTAGTGCATTATTTAATGCTATTGGATCTTTTGGATAATTCTTGGCTTAATTTCTTAGCTACTTGA
CircID chr4:107911763|107912000
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MFLNFFKVMPKNGLKNLIRFNVTRFSALFNAIGSFG
Nucleotide Sequence CTGTTTCTAAATTTCTTTAAGGTGATGCCAAAAAATGGATTAAAAAATCTGATCAGATTTAATGTTACCAGATTTAGTGCATTATTTAATGCTATTGGATCTTTTGGATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab