CircRNA Information

General Information
circRNA Basic Information
CircID chr4:107911953|107912121
Strand +
CircType exon
Host Gene ENSG00000164023.13;
Algorism CIRI2;
Sequence TTAAAGGTCAATTTTGTGTAGTCAAGGCTGACTAGTTTATAATGATACATTTGGGGATGTTTTCCATTCTAAATGAAAGAAAAATTTCACCTTCAATATAAACATAACTGCCTCCTTCTACCCGCATTGGCCTCTCCACCCTCTGCCCCAGTGTTGATAACTTTGCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:107911953|107912121 hsa-miR-192-5p 0 0 1
chr4:107911953|107912121 hsa-miR-192-3p 0 0 1
chr4:107911953|107912121 hsa-miR-215-5p 0 0 1
chr4:107911953|107912121 hsa-miR-215-3p 0 0 1
chr4:107911953|107912121 hsa-miR-141-5p 0 0 1
chr4:107911953|107912121 hsa-miR-141-3p 0 0 1
chr4:107911953|107912121 hsa-miR-185-5p 0 0 1
chr4:107911953|107912121 hsa-miR-185-3p 0 0 1
chr4:107911953|107912121 hsa-miR-200a-5p 0 0 1
chr4:107911953|107912121 hsa-miR-200a-3p 0 0 1
chr4:107911953|107912121 hsa-miR-340-5p 0 0 1
chr4:107911953|107912121 hsa-miR-340-3p 0 0 1
chr4:107911953|107912121 hsa-miR-493-5p 0 0 1
chr4:107911953|107912121 hsa-miR-493-3p 0 0 1
chr4:107911953|107912121 hsa-miR-527 0 0 1
chr4:107911953|107912121 hsa-miR-570-5p 0 0 1
chr4:107911953|107912121 hsa-miR-570-3p 0 0 1
chr4:107911953|107912121 hsa-miR-579-5p 0 0 1
chr4:107911953|107912121 hsa-miR-579-3p 0 0 1
chr4:107911953|107912121 hsa-miR-650 0 0 1
chr4:107911953|107912121 hsa-miR-1827 0 0 1
chr4:107911953|107912121 hsa-miR-486-3p 0 0 1
chr4:107911953|107912121 hsa-miR-518a-5p 0 0 1
chr4:107911953|107912121 hsa-miR-886-3p 0 0 1
chr4:107911953|107912121 hsa-miR-663a 1 0 0
chr4:107911953|107912121 hsa-miR-658 1 0 0
chr4:107911953|107912121 hsa-miR-762 1 0 0
chr4:107911953|107912121 hsa-miR-1275 1 0 0
chr4:107911953|107912121 hsa-miR-3132 1 1 0
chr4:107911953|107912121 hsa-miR-3138 1 0 0
chr4:107911953|107912121 hsa-miR-3141 1 0 0
chr4:107911953|107912121 hsa-miR-3196 1 0 0
chr4:107911953|107912121 hsa-miR-4298 1 0 0
chr4:107911953|107912121 hsa-miR-4260 1 0 0
chr4:107911953|107912121 hsa-miR-4271 1 0 0
chr4:107911953|107912121 hsa-miR-3621 1 0 0
chr4:107911953|107912121 hsa-miR-3936 1 0 0
chr4:107911953|107912121 hsa-miR-3945 1 0 0
chr4:107911953|107912121 hsa-miR-4429 1 0 0
chr4:107911953|107912121 hsa-miR-4463 1 0 0
chr4:107911953|107912121 hsa-miR-3975 1 0 0
chr4:107911953|107912121 hsa-miR-4651 1 0 0
chr4:107911953|107912121 hsa-miR-4656 1 0 0
chr4:107911953|107912121 hsa-miR-4688 1 0 0
chr4:107911953|107912121 hsa-miR-4706 1 0 0
chr4:107911953|107912121 hsa-miR-4739 1 0 0
chr4:107911953|107912121 hsa-miR-5090 1 1 0
chr4:107911953|107912121 hsa-miR-5192 1 0 0
chr4:107911953|107912121 hsa-miR-5787 1 0 0
chr4:107911953|107912121 hsa-miR-6086 1 0 0
chr4:107911953|107912121 hsa-miR-6133 1 0 0
chr4:107911953|107912121 hsa-miR-6745 1 1 0
chr4:107911953|107912121 hsa-miR-7150 1 0 0
chr4:107911953|107912121 hsa-miR-8072 1 0 0
chr4:107911953|107912121 hsa-miR-8089 1 0 0
chr4:107911953|107912121 hsa-miR-512-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6765-5p 1 0 0
chr4:107911953|107912121 hsa-miR-7106-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6825-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6894-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6510-5p 1 0 0
chr4:107911953|107912121 hsa-miR-8071 1 0 0
chr4:107911953|107912121 hsa-miR-1227-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6089 1 0 0
chr4:107911953|107912121 hsa-miR-6873-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6880-5p 1 0 0
chr4:107911953|107912121 hsa-miR-7847-3p 1 0 0
chr4:107911953|107912121 hsa-miR-4695-5p 0 1 0
chr4:107911953|107912121 hsa-miR-6890-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6820-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6727-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6721-5p 1 0 0
chr4:107911953|107912121 hsa-miR-197-5p 1 1 0
chr4:107911953|107912121 hsa-miR-3151-5p 1 0 0
chr4:107911953|107912121 hsa-miR-3180-3p 1 0 0
chr4:107911953|107912121 hsa-miR-6748-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6732-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6798-5p 1 0 0
chr4:107911953|107912121 hsa-miR-2467-3p 1 1 0
chr4:107911953|107912121 hsa-miR-6782-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6786-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6835-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4650-3p 1 1 0
chr4:107911953|107912121 hsa-miR-4787-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6781-5p 1 0 0
chr4:107911953|107912121 hsa-let-7i-5p 0 1 0
chr4:107911953|107912121 hsa-miR-4750-5p 1 0 0
chr4:107911953|107912121 hsa-miR-7159-5p 1 0 0
chr4:107911953|107912121 hsa-miR-98-5p 0 1 0
chr4:107911953|107912121 hsa-miR-1207-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4763-3p 1 0 0
chr4:107911953|107912121 hsa-miR-6769b-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6816-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6870-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6775-5p 0 1 0
chr4:107911953|107912121 hsa-miR-3180 1 0 0
chr4:107911953|107912121 hsa-miR-6737-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6743-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6752-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6756-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6769a-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6803-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6819-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6842-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6851-5p 1 0 0
chr4:107911953|107912121 hsa-miR-7110-5p 1 0 0
chr4:107911953|107912121 hsa-miR-11181-3p 1 0 0
chr4:107911953|107912121 hsa-miR-1249-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6722-3p 1 1 0
chr4:107911953|107912121 hsa-miR-6751-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6774-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6808-5p 1 0 0
chr4:107911953|107912121 hsa-miR-7111-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4728-5p 1 0 0
chr4:107911953|107912121 hsa-miR-5196-5p 1 0 0
chr4:107911953|107912121 hsa-miR-10396b-5p 1 0 0
chr4:107911953|107912121 hsa-miR-1237-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4726-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6735-5p 1 0 0
chr4:107911953|107912121 hsa-miR-675-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6831-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4700-5p 1 0 0
chr4:107911953|107912121 hsa-miR-4667-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6791-5p 1 0 0
chr4:107911953|107912121 hsa-miR-6762-5p 1 0 0
chr4:107911953|107912121 hsa-miR-320a-3p 1 0 0
chr4:107911953|107912121 hsa-miR-320b 1 0 0
chr4:107911953|107912121 hsa-miR-320c 1 0 0
chr4:107911953|107912121 hsa-miR-363-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr4:107911953|107912121
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MKEKFHLQYKHNCLLLPALASPPSAPVLITLQ
Nucleotide Sequence ATGAAAGAAAAATTTCACCTTCAATATAAACATAACTGCCTCCTTCTACCCGCATTGGCCTCTCCACCCTCTGCCCCAGTGTTGATAACTTTGCAA
CircID chr4:107911953|107912121
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MGQRVERPMRVEGGSYVYIEGEIFLSFRMENIPKCIIIN
Nucleotide Sequence CTGGGGCAGAGGGTGGAGAGGCCAATGCGGGTAGAAGGAGGCAGTTATGTTTATATTGAAGGTGAAATTTTTCTTTCATTTAGAATGGAAAACATCCCCAAATGTATCATTATAAACTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab