CircNet

General Information

circRNA Basic Information

CircID	chr4:113537341\|113552096
Strand	-
CircType	exon
Host Gene	ENSG00000145349.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTTACTGGAGGTGAACTGTTTGAAGACATAGTGGCAAGAGAATACTACAGTGAAGCTGATGCCAGTCATTGTATACAGCAGATTCTAGAAAGTGTTAATCATTGTCACCTAAATGGCATAGTTCACAGGGACCTGAAGCCTGAGAATTTGCTTTTAGCTAGCAAATCCAAGGGAGCAGCTGTGAAATTGGCAGACTTTGGCTTAGCCATAGAAGTTCAAGGGGACCAGCAGGCGTGGTTTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:113537341\|113552096	hsa-miR-498-5p	1	1	1
chr4:113537341\|113552096	hsa-miR-498-3p	1	1	1
chr4:113537341\|113552096	hsa-miR-4494	1	1	1
chr4:113537341\|113552096	hsa-miR-6081	1	1	1
chr4:113537341\|113552096	hsa-miR-139-5p	1	1	1
chr4:113537341\|113552096	hsa-miR-6515-5p	1	1	1
chr4:113537341\|113552096	hsa-miR-3677-5p	1	1	1
chr4:113537341\|113552096	hsa-miR-6760-5p	1	1	1
chr4:113537341\|113552096	hsa-miR-3191-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:113537341\|113552096
ORF Type	ORF1
Protein Length	70
Nucleotide Length	210
Protein Sequence	VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF
Nucleotide Sequence	GTGGCAAGAGAATACTACAGTGAAGCTGATGCCAGTCATTGTATACAGCAGATTCTAGAAAGTGTTAATCATTGTCACCTAAATGGCATAGTTCACAGGGACCTGAAGCCTGAGAATTTGCTTTTAGCTAGCAAATCCAAGGGAGCAGCTGTGAAATTGGCAGACTTTGGCTTAGCCATAGAAGTTCAAGGGGACCAGCAGGCGTGGTTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:113537341\|113552096	U2AF2	1	4	0
chr4:113537341\|113552096	BUD13	0	0	1
chr4:113537341\|113552096	ELAVL1	0	0	1
chr4:113537341\|113552096	ACIN1	0	0	1
chr4:113537341\|113552096	DDX54	0	0	2
chr4:113537341\|113552096	FUS	0	3	0
chr4:113537341\|113552096	PRPF8	0	2	0
chr4:113537341\|113552096	SRSF10	0	1	0
chr4:113537341\|113552096	TAF15	0	2	0
chr4:113537341\|113552096	AGO2	1	0	0
chr4:113537341\|113552096	FMR1	0	1	0
chr4:113537341\|113552096	PTBP1	0	0	1
chr4:113537341\|113552096	IGF2BP2	0	1	1
chr4:113537341\|113552096	TRA2A	0	0	1
chr4:113537341\|113552096	EIF4A3	0	1	4
chr4:113537341\|113552096	NOP58	0	2	1

CircRNA Information