CircNet

General Information

circRNA Basic Information

CircID	chr4:119245337\|119273708
Strand	+
CircType	exon
Host Gene	ENSG00000145390.11;
Algorism	CIRI2;find_circ;DCC;
Sequence	GTTTTATGGCAATTGGATATATTCCGACGAAGCTTGCGGGTTTTGACTGGACATGTTTGTCAGGGAGATGCCTGTATATTTTGTGCATTGAAGACGATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGATGATGCTGCGGAGTGCTTTTGACCAGATTACGACAAGCAACCTAAATAAAGAACGTGGGGACTGTACCTCCCTTCAGAGCCAACATCACTTAGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:119245337\|119273708
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MLLQKVSKMSSDFNLALWMMLRSAFDQITTSNLNKERGDCTSLQSQHHLE
Nucleotide Sequence	ATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGATGATGCTGCGGAGTGCTTTTGACCAGATTACGACAAGCAACCTAAATAAAGAACGTGGGGACTGTACCTCCCTTCAGAGCCAACATCACTTAGAA

CircID	chr4:119245337\|119273708
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MAIGYIPTKLAGFDWTCLSGRCLYILCIEDDICTVPTQSRKSTSLR*
Nucleotide Sequence	ATGGCAATTGGATATATTCCGACGAAGCTTGCGGGTTTTGACTGGACATGTTTGTCAGGGAGATGCCTGTATATTTTGTGCATTGAAGACGATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAA

CircID	chr4:119245337\|119273708
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLSEGSAFSRLCWNCANIVFNAQNIQASP*
Nucleotide Sequence	ATGTTATCTGAGGGAAGTGCTTTTTCTCGACTGTGTTGGAACTGTGCAAATATCGTCTTCAATGCACAAAATATACAGGCATCTCCCTGA

CircID	chr4:119245337\|119273708
ORF Type	ORF4
Protein Length	73
Nucleotide Length	219
Protein Sequence	LDIFRRSLRVLTGHVCQGDACIFCALKTIFAQFQHSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECF*
Nucleotide Sequence	TTGGATATATTCCGACGAAGCTTGCGGGTTTTGACTGGACATGTTTGTCAGGGAGATGCCTGTATATTTTGTGCATTGAAGACGATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGATGATGCTGCGGAGTGCTTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:119245337\|119273708	KHSRP	4	2	0
chr4:119245337\|119273708	ELAVL1	0	0	1
chr4:119245337\|119273708	UPF1	0	1	0
chr4:119245337\|119273708	TAF15	2	0	0
chr4:119245337\|119273708	FMR1	0	0	1
chr4:119245337\|119273708	TROVE2	1	0	0
chr4:119245337\|119273708	FUS	2	0	0
chr4:119245337\|119273708	SRSF7	0	0	1
chr4:119245337\|119273708	SRSF1	0	0	1
chr4:119245337\|119273708	NOP58	0	2	1
chr4:119245337\|119273708	U2AF1	1	0	1
chr4:119245337\|119273708	ADAR	1	0	0
chr4:119245337\|119273708	U2AF2	23	1	4
chr4:119245337\|119273708	SRSF9	0	0	1
chr4:119245337\|119273708	NOP56	0	1	0
chr4:119245337\|119273708	DDX54	0	0	3
chr4:119245337\|119273708	HNRNPK	1	0	0
chr4:119245337\|119273708	PTBP1	2	0	1
chr4:119245337\|119273708	HNRNPD	0	1	0
chr4:119245337\|119273708	FXR1	0	0	1
chr4:119245337\|119273708	IGF2BP1	0	0	1
chr4:119245337\|119273708	TARDBP	0	1	0
chr4:119245337\|119273708	BUD13	0	1	2
chr4:119245337\|119273708	RBFOX2	6	0	0
chr4:119245337\|119273708	RBM47	3	0	1
chr4:119245337\|119273708	TIAL1	1	0	0
chr4:119245337\|119273708	EIF4A3	1	1	6
chr4:119245337\|119273708	FBL	0	0	1

CircRNA Information