CircRNA Information

General Information
circRNA Basic Information
CircID chr4:1223129|1223265
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTGCCCATCTGAGGCCTGGGCGGCCCCTCCTATGTCAGGGCCATGGCCCGCATGTGTGGTTTGTTGAGGGGAGGAGGGAGGGTGGGCAGGAAGCCCAGGTTGGGGCAGAGGTCGGGAGGGGCCGGGGACTCGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:1223129|1223265 hsa-miR-328-5p 0 0 1
chr4:1223129|1223265 hsa-miR-328-3p 0 0 1
chr4:1223129|1223265 hsa-miR-495-5p 0 0 1
chr4:1223129|1223265 hsa-miR-495-3p 0 0 1
chr4:1223129|1223265 hsa-miR-1291 0 1 1
chr4:1223129|1223265 hsa-miR-490-3p 0 0 1
chr4:1223129|1223265 hsa-miR-423-5p 0 0 1
chr4:1223129|1223265 hsa-miR-324-3p 1 0 1
chr4:1223129|1223265 hsa-miR-516a-3p 0 0 1
chr4:1223129|1223265 hsa-miR-326 1 0 0
chr4:1223129|1223265 hsa-miR-346 1 0 0
chr4:1223129|1223265 hsa-miR-661 1 1 0
chr4:1223129|1223265 hsa-miR-1470 1 0 0
chr4:1223129|1223265 hsa-miR-1913 1 1 0
chr4:1223129|1223265 hsa-miR-1976 1 0 0
chr4:1223129|1223265 hsa-miR-718 1 0 0
chr4:1223129|1223265 hsa-miR-4268 1 0 0
chr4:1223129|1223265 hsa-miR-4279 1 0 0
chr4:1223129|1223265 hsa-miR-4290 1 1 0
chr4:1223129|1223265 hsa-miR-4469 1 0 0
chr4:1223129|1223265 hsa-miR-3972 1 0 0
chr4:1223129|1223265 hsa-miR-5193 1 1 0
chr4:1223129|1223265 hsa-miR-12116 1 0 0
chr4:1223129|1223265 hsa-miR-6749-3p 1 1 0
chr4:1223129|1223265 hsa-miR-18a-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6747-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4665-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6836-3p 1 0 0
chr4:1223129|1223265 hsa-miR-766-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6892-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3189-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6849-3p 1 0 0
chr4:1223129|1223265 hsa-miR-7110-3p 1 0 0
chr4:1223129|1223265 hsa-miR-1915-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6845-3p 1 0 0
chr4:1223129|1223265 hsa-miR-877-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6735-3p 1 0 0
chr4:1223129|1223265 hsa-miR-615-3p 1 0 0
chr4:1223129|1223265 hsa-miR-615-5p 1 0 0
chr4:1223129|1223265 hsa-miR-939-3p 1 1 0
chr4:1223129|1223265 hsa-miR-4763-5p 1 1 0
chr4:1223129|1223265 hsa-miR-6763-3p 1 1 0
chr4:1223129|1223265 hsa-miR-7108-3p 1 0 0
chr4:1223129|1223265 hsa-miR-1247-5p 1 0 0
chr4:1223129|1223265 hsa-miR-4707-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6894-3p 1 1 0
chr4:1223129|1223265 hsa-miR-7113-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3667-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3191-5p 1 0 0
chr4:1223129|1223265 hsa-miR-4783-5p 1 0 0
chr4:1223129|1223265 hsa-miR-4717-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6821-3p 0 1 0
chr4:1223129|1223265 hsa-miR-5196-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4667-3p 1 1 0
chr4:1223129|1223265 hsa-miR-1306-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6769a-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4707-5p 1 0 0
chr4:1223129|1223265 hsa-miR-1236-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3065-5p 0 1 0
chr4:1223129|1223265 hsa-miR-4687-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6813-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4758-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6867-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6887-3p 0 1 0
chr4:1223129|1223265 hsa-miR-6793-3p 1 1 0
chr4:1223129|1223265 hsa-miR-6778-3p 1 0 0
chr4:1223129|1223265 hsa-miR-1224-3p 1 1 0
chr4:1223129|1223265 hsa-miR-6715a-3p 0 1 0
chr4:1223129|1223265 hsa-miR-2276-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6752-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4632-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6865-3p 1 1 0
chr4:1223129|1223265 hsa-miR-1914-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6886-3p 1 0 0
chr4:1223129|1223265 hsa-miR-5088-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6738-3p 1 1 0
chr4:1223129|1223265 hsa-miR-4749-3p 1 1 0
chr4:1223129|1223265 hsa-miR-4649-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6777-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6760-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6880-3p 0 1 0
chr4:1223129|1223265 hsa-miR-1178-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3173-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6734-3p 1 1 0
chr4:1223129|1223265 hsa-miR-6812-3p 1 0 0
chr4:1223129|1223265 hsa-miR-1249-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6759-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6780b-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6800-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3162-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4740-3p 1 0 0
chr4:1223129|1223265 hsa-miR-497-3p 0 1 0
chr4:1223129|1223265 hsa-miR-6813-5p 0 1 0
chr4:1223129|1223265 hsa-miR-3127-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4685-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6877-3p 1 0 0
chr4:1223129|1223265 hsa-miR-3184-5p 0 1 0
chr4:1223129|1223265 hsa-miR-4722-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6727-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6511a-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6756-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6784-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6862-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6801-3p 1 0 0
chr4:1223129|1223265 hsa-miR-6829-3p 1 0 0
chr4:1223129|1223265 hsa-miR-10392-3p 1 1 0
chr4:1223129|1223265 hsa-miR-11181-5p 1 0 0
chr4:1223129|1223265 hsa-miR-4723-3p 1 0 0
chr4:1223129|1223265 hsa-miR-483-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4701-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6744-3p 1 1 0
chr4:1223129|1223265 hsa-miR-6783-3p 1 0 0
chr4:1223129|1223265 hsa-miR-4691-5p 1 0 0
chr4:1223129|1223265 hsa-miR-6827-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:1223129|1223265
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MRPGRPLLCQGHGPHVWFVEGRREGGQEAQVGAEVGRGRGLG
Nucleotide Sequence CTGAGGCCTGGGCGGCCCCTCCTATGTCAGGGCCATGGCCCGCATGTGTGGTTTGTTGAGGGGAGGAGGGAGGGTGGGCAGGAAGCCCAGGTTGGGGCAGAGGTCGGGAGGGGCCGGGGACTCGGG

CircID chr4:1223129|1223265
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MGGPSYVRAMARMCGLLRGGGRVGRKPRLGQRSGGAGDSG
Nucleotide Sequence CTGGGCGGCCCCTCCTATGTCAGGGCCATGGCCCGCATGTGTGGTTTGTTGAGGGGAGGAGGGAGGGTGGGCAGGAAGCCCAGGTTGGGGCAGAGGTCGGGAGGGGCCGGGGACTCGGGG

CircID chr4:1223129|1223265
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MPQPGLPAHPPSSPQQTTHAGHGPDIGGAAQASDGQ
Nucleotide Sequence CTGCCCCAACCTGGGCTTCCTGCCCACCCTCCCTCCTCCCCTCAACAAACCACACATGCGGGCCATGGCCCTGACATAGGAGGGGCCGCCCAGGCCTCAGATGGGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites