CircNet

General Information

circRNA Basic Information

CircID	chr4:128077788\|128098330
Strand	+
CircType	exon
Host Gene	ENSG00000138709.17;
Algorism	CIRI2;DCC;find_circ;
Sequence	TGAATATTACTTCAGTGTAGAAAATTTGGAACGAGACTTCTTTCTTCGGGGAAAGATGGATGAACAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAGGCTCTCACTACAAACCTTAATCTCATCTTAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:128077788\|128098330	hsa-miR-5087	1	0	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:128077788\|128098330
ORF Type	ORF1
Protein Length	30
Nucleotide Length	90
Protein Sequence	MDEQGFLPISLIAGFQRVQALTTNLNLILE
Nucleotide Sequence	ATGGATGAACAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAGGCTCTCACTACAAACCTTAATCTCATCTTAGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:128077788\|128098330	NOP56	0	1	0
chr4:128077788\|128098330	ELAVL1	4	1	1
chr4:128077788\|128098330	PRPF8	0	3	0
chr4:128077788\|128098330	FMR1	0	1	0
chr4:128077788\|128098330	DGCR8	1	1	0
chr4:128077788\|128098330	QKI	0	5	4
chr4:128077788\|128098330	SRSF1	0	1	1
chr4:128077788\|128098330	NOP58	0	1	2
chr4:128077788\|128098330	SRSF3	0	1	0
chr4:128077788\|128098330	U2AF1	0	4	0
chr4:128077788\|128098330	U2AF2	3	21	1
chr4:128077788\|128098330	DDX54	0	0	5
chr4:128077788\|128098330	HNRNPK	0	1	0
chr4:128077788\|128098330	PCBP2	0	1	0
chr4:128077788\|128098330	HNRNPM	0	1	0
chr4:128077788\|128098330	HNRNPL	0	2	0
chr4:128077788\|128098330	PTBP1	1	13	0
chr4:128077788\|128098330	HNRNPC	1	19	0
chr4:128077788\|128098330	TRA2A	3	0	0
chr4:128077788\|128098330	HNRNPA1	0	4	0
chr4:128077788\|128098330	FIP1L1	0	1	0
chr4:128077788\|128098330	IGF2BP1	0	0	1
chr4:128077788\|128098330	IGF2BP2	2	1	1
chr4:128077788\|128098330	TARDBP	0	1	0
chr4:128077788\|128098330	BUD13	1	0	0
chr4:128077788\|128098330	EIF4G2	1	0	0
chr4:128077788\|128098330	CSTF2T	0	0	1
chr4:128077788\|128098330	RBM22	0	1	0
chr4:128077788\|128098330	AGO2	0	1	0
chr4:128077788\|128098330	ATXN2	0	1	0
chr4:128077788\|128098330	EIF4A3	0	0	3
chr4:128077788\|128098330	FBL	0	0	2

CircRNA Information