CircRNA Information

General Information
circRNA Basic Information
CircID chr4:1394151|1394251
Strand +
CircType exon
Host Gene ENSG00000179979.8;
Algorism CIRI2;
Sequence GAGATGCCCACAGTGGCCGCTGAGAAGCTCTGCCACACTCCTGGAGGCATGGAAGGCTGTGCCCACACAGGCACAGAGCTGTGTGTGTGCCCGAGAGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr4:1394151|1394251
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MPTVAAEKLCHTPGGMEGCAHTGTELCVCPRG
Nucleotide Sequence ATGCCCACAGTGGCCGCTGAGAAGCTCTGCCACACTCCTGGAGGCATGGAAGGCTGTGCCCACACAGGCACAGAGCTGTGTGTGTGCCCGAGAGGA

CircID chr4:1394151|1394251
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MRSSATLLEAWKAVPTQAQSCVCAREE
Nucleotide Sequence CTGAGAAGCTCTGCCACACTCCTGGAGGCATGGAAGGCTGTGCCCACACAGGCACAGAGCTGTGTGTGTGCCCGAGAGGAA

CircID chr4:1394151|1394251
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MCLCGHSLPCLQECGRASQRPLWAS
Nucleotide Sequence CTGTGCCTGTGTGGGCACAGCCTTCCATGCCTCCAGGAGTGTGGCAGAGCTTCTCAGCGGCCACTGTGGGCATCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites