CircNet

General Information

circRNA Basic Information

CircID	chr4:140686344\|140686462
Strand	-
CircType	exon
Host Gene	ENSG00000109436.7;
Algorism	CIRI2;
Sequence	CTGTATTTTTCCTCTCACAAATGTGGTGATATCATTCTCATTTTCAAAGATGGAGAGTGTCTGCAAGAGATTTTGCTCAAGCCATTCCCAGTGTTCAGTGATTTCTTTCCTGGAACCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:140686344\|140686462	hsa-miR-197-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-197-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-141-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-141-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-136-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-136-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-200a-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-200a-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-34b-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-34b-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-135b-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-135b-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-580-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-580-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-758-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-758-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-665	0	0	1
chr4:140686344\|140686462	hsa-miR-216b-5p	0	0	1
chr4:140686344\|140686462	hsa-miR-216b-3p	0	0	1
chr4:140686344\|140686462	hsa-miR-548p	0	1	1
chr4:140686344\|140686462	hsa-miR-220b	0	0	1
chr4:140686344\|140686462	hsa-miR-135a	0	0	1
chr4:140686344\|140686462	hsa-miR-4533	1	1	0
chr4:140686344\|140686462	hsa-miR-4655-5p	1	0	0
chr4:140686344\|140686462	hsa-miR-144-5p	0	1	0
chr4:140686344\|140686462	hsa-miR-6716-5p	1	1	0
chr4:140686344\|140686462	hsa-miR-1292-5p	1	0	0
chr4:140686344\|140686462	hsa-miR-5010-5p	1	0	0
chr4:140686344\|140686462	hsa-miR-4724-5p	0	1	0
chr4:140686344\|140686462	hsa-miR-513b-3p	1	0	0
chr4:140686344\|140686462	hsa-miR-6778-5p	0	1	0
chr4:140686344\|140686462	hsa-miR-642b-3p	1	0	0
chr4:140686344\|140686462	hsa-miR-6780b-5p	1	0	0
chr4:140686344\|140686462	hsa-miR-619-5p	1	0	0
chr4:140686344\|140686462	hsa-miR-642a-3p	1	0	0
chr4:140686344\|140686462	hsa-miR-181b-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:140686344\|140686462
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	LYFSSHKCGDIILIFKDGECLQEILLKPFPVFSDFFPGT
Nucleotide Sequence	CTGTATTTTTCCTCTCACAAATGTGGTGATATCATTCTCATTTTCAAAGATGGAGAGTGTCTGCAAGAGATTTTGCTCAAGCCATTCCCAGTGTTCAGTGATTTCTTTCCTGGAACC

CircID	chr4:140686344\|140686462
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MNTGNGLSKISCRHSPSLKMRMISPHL
Nucleotide Sequence	CTGAACACTGGGAATGGCTTGAGCAAAATCTCTTGCAGACACTCTCCATCTTTGAAAATGAGAATGATATCACCACATTTGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information