CircNet

General Information

circRNA Basic Information

CircID	chr4:143548004\|143548115
Strand	+
CircType	exon
Host Gene	ENSG00000153147.5;
Algorism	CIRI2;
Sequence	CAGTCAAATCTGAACTGAGGAGAGTTGCGAATACACTGTCGCAATTCATCATAAACATTTTCTTTGTCAAATCCAAGTTTGTGAAGCATACAAATCAGAAAACGATCTTCTT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr4:143548004\|143548115	hsa-miR-630	0	1
chr4:143548004\|143548115	hsa-miR-890	0	1
chr4:143548004\|143548115	hsa-miR-943	0	1
chr4:143548004\|143548115	hsa-miR-297	0	1
chr4:143548004\|143548115	hsa-miR-1290	0	1
chr4:143548004\|143548115	hsa-miR-1272	1	1
chr4:143548004\|143548115	hsa-miR-513b-5p	0	1
chr4:143548004\|143548115	hsa-miR-513b-3p	0	1
chr4:143548004\|143548115	hsa-miR-1322	0	1
chr4:143548004\|143548115	hsa-miR-876-5p	0	1
chr4:143548004\|143548115	hsa-miR-219-2-3p	0	1
chr4:143548004\|143548115	hsa-miR-514	0	1
chr4:143548004\|143548115	hsa-miR-5087	1	0
chr4:143548004\|143548115	hsa-miR-10395-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:143548004\|143548115
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MRRVANTLSQFIINIFFVKSKFVKHTNQKTIF
Nucleotide Sequence	CTGAGGAGAGTTGCGAATACACTGTCGCAATTCATCATAAACATTTTCTTTGTCAAATCCAAGTTTGTGAAGCATACAAATCAGAAAACGATCTTC

CircID	chr4:143548004\|143548115
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MDLTKKMFMMNCDSVFATLLSSDLT
Nucleotide Sequence	TTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGACT

CircID	chr4:143548004\|143548115
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MICMLHKLGFDKENVYDELRQCIRNSPQFRFD
Nucleotide Sequence	CTGATTTGTATGCTTCACAAACTTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information