CircRNA Information

General Information
circRNA Basic Information
CircID chr4:147637458|147637590
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence AACAGCAGCTGACATCTACTCATTTACCATGAATCCCAAATACAGTACAAATTTGTTACCTAAAATCCTCATGTTGTACAATAGATCTCTAGACTTATTCATCCTACATATCTGCTACCTTGAATCCTTTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:147637458|147637590 hsa-miR-495-5p 0 0 1
chr4:147637458|147637590 hsa-miR-495-3p 0 0 1
chr4:147637458|147637590 hsa-miR-1264 0 0 1
chr4:147637458|147637590 hsa-miR-190b-5p 0 0 1
chr4:147637458|147637590 hsa-miR-190b-3p 0 0 1
chr4:147637458|147637590 hsa-miR-1183 1 0 1
chr4:147637458|147637590 hsa-miR-1290 0 0 1
chr4:147637458|147637590 hsa-miR-1265 0 0 1
chr4:147637458|147637590 hsa-miR-331-5p 0 0 1
chr4:147637458|147637590 hsa-miR-1207-3p 0 0 1
chr4:147637458|147637590 hsa-miR-576-3p 0 0 1
chr4:147637458|147637590 hsa-miR-518d-5p 0 0 1
chr4:147637458|147637590 hsa-miR-519b-5p 0 0 1
chr4:147637458|147637590 hsa-miR-519c-5p 0 0 1
chr4:147637458|147637590 hsa-miR-520c-5p 0 0 1
chr4:147637458|147637590 hsa-miR-769-3p 0 0 1
chr4:147637458|147637590 hsa-miR-450b-3p 0 0 1
chr4:147637458|147637590 hsa-miR-526a 0 0 1
chr4:147637458|147637590 hsa-miR-1185 0 0 1
chr4:147637458|147637590 hsa-miR-190 0 0 1
chr4:147637458|147637590 hsa-miR-6728-5p 0 1 0
chr4:147637458|147637590 hsa-miR-5088-5p 1 0 0
chr4:147637458|147637590 hsa-miR-885-3p 1 0 0
chr4:147637458|147637590 hsa-let-7d-5p 1 0 0
chr4:147637458|147637590 hsa-let-7b-5p 1 1 0
chr4:147637458|147637590 hsa-let-7g-5p 1 0 0
chr4:147637458|147637590 hsa-miR-6864-5p 1 0 0
chr4:147637458|147637590 hsa-miR-6869-5p 0 1 0
chr4:147637458|147637590 hsa-let-7i-5p 1 1 0
chr4:147637458|147637590 hsa-let-7f-5p 1 1 0
chr4:147637458|147637590 hsa-let-7c-5p 1 1 0
chr4:147637458|147637590 hsa-let-7a-5p 1 1 0
chr4:147637458|147637590 hsa-miR-6865-5p 1 0 0
chr4:147637458|147637590 hsa-miR-4632-5p 1 0 0
chr4:147637458|147637590 hsa-miR-6831-5p 1 0 0
chr4:147637458|147637590 hsa-miR-4758-5p 1 0 0
chr4:147637458|147637590 hsa-miR-4769-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr4:147637458|147637590
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MNPKYSTNLLPKILMLYNRSLDLFILHICYLESFD
Nucleotide Sequence ATGAATCCCAAATACAGTACAAATTTGTTACCTAAAATCCTCATGTTGTACAATAGATCTCTAGACTTATTCATCCTACATATCTGCTACCTTGAATCCTTTGAC

CircID chr4:147637458|147637590
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MNKSRDLLYNMRILGNKFVLYLGFMVNE
Nucleotide Sequence ATGAATAAGTCTAGAGATCTATTGTACAACATGAGGATTTTAGGTAACAAATTTGTACTGTATTTGGGATTCATGGTAAATGAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites