CircNet

General Information

circRNA Basic Information

CircID	chr4:1716481\|1716630
Strand	-
CircType	exon
Host Gene	ENSG00000168936.9;
Algorism	CIRI2;
Sequence	CCCTACCCAGGAGTCTGAGACCTCGGCCTTCCCTGGACTTGTTGGGCAGAAAAAGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:1716481\|1716630	hsa-miR-579-5p	0	0	1
chr4:1716481\|1716630	hsa-miR-579-3p	0	0	1
chr4:1716481\|1716630	hsa-miR-608	0	1	1
chr4:1716481\|1716630	hsa-miR-1293	0	0	1
chr4:1716481\|1716630	hsa-miR-491-5p	0	0	1
chr4:1716481\|1716630	hsa-miR-339-3p	0	0	1
chr4:1716481\|1716630	hsa-miR-324-3p	0	0	1
chr4:1716481\|1716630	hsa-miR-342-5p	0	0	1
chr4:1716481\|1716630	hsa-miR-544	0	0	1
chr4:1716481\|1716630	hsa-miR-1913	0	1	0
chr4:1716481\|1716630	hsa-miR-4741	0	1	0
chr4:1716481\|1716630	hsa-miR-6861-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-4687-3p	1	0	0
chr4:1716481\|1716630	hsa-miR-6089	1	0	0
chr4:1716481\|1716630	hsa-miR-7154-3p	0	1	0
chr4:1716481\|1716630	hsa-miR-7160-5p	1	0	0
chr4:1716481\|1716630	hsa-miR-6762-3p	0	1	0
chr4:1716481\|1716630	hsa-miR-4655-5p	1	0	0
chr4:1716481\|1716630	hsa-miR-6776-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6742-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6871-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6796-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-185-3p	0	1	0
chr4:1716481\|1716630	hsa-miR-1229-5p	1	1	0
chr4:1716481\|1716630	hsa-miR-3922-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6887-3p	0	1	0
chr4:1716481\|1716630	hsa-miR-6882-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-5004-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6748-3p	0	1	0
chr4:1716481\|1716630	hsa-miR-1233-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-1273h-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-4763-3p	1	0	0
chr4:1716481\|1716630	hsa-miR-6778-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6812-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6865-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6756-5p	1	1	0
chr4:1716481\|1716630	hsa-miR-6819-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6780a-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-5196-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6795-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-6887-5p	0	1	0
chr4:1716481\|1716630	hsa-miR-3085-5p	1	0	0
chr4:1716481\|1716630	hsa-miR-4747-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:1716481\|1716630
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	MRPRPSLDLLGRKRHQGQDEKPGGAAPQMRAL
Nucleotide Sequence	CTGAGACCTCGGCCTTCCCTGGACTTGTTGGGCAGAAAAAGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGCTCTGA

CircID	chr4:1716481\|1716630
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MFLGGVAMGGQVRAPSFVGLPLRVSHPVLGAFFCPTSPGKAEVSDSWVG
Nucleotide Sequence	CTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTCATTTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTCTCAGACTCCTGGGTAGGG

CircID	chr4:1716481\|1716630
ORF Type	ORF3
Protein Length	31
Nucleotide Length	96
Protein Sequence	MWGCPSGFLILSLVPFSAQQVQGRPRSQTPG
Nucleotide Sequence	TTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTCTCAGACTCCTGGGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information