CircRNA Information

General Information
circRNA Basic Information
CircID chr4:1716595|1716705
Strand -
CircType exon
Host Gene ENSG00000168936.9;
Algorism CIRI2;
Sequence CTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAACTGGTCACAGCCACCAGGAAGCCCCAGGACTGCTCCCACACCACAGCAGTGCCCTCTTCTCCATCCCACC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr4:1716595|1716705 hsa-miR-608 1 1 1
chr4:1716595|1716705 hsa-miR-920 1 0 1
chr4:1716595|1716705 hsa-miR-1293 0 0 1
chr4:1716595|1716705 hsa-miR-1253 0 0 1
chr4:1716595|1716705 hsa-miR-423-5p 0 0 1
chr4:1716595|1716705 hsa-miR-342-5p 0 0 1
chr4:1716595|1716705 hsa-miR-516a-3p 0 0 1
chr4:1716595|1716705 hsa-miR-637 1 0 0
chr4:1716595|1716705 hsa-miR-762 1 0 0
chr4:1716595|1716705 hsa-miR-3137 1 0 0
chr4:1716595|1716705 hsa-miR-3154 1 0 0
chr4:1716595|1716705 hsa-miR-3911 1 0 0
chr4:1716595|1716705 hsa-miR-4440 1 1 0
chr4:1716595|1716705 hsa-miR-4456 0 1 0
chr4:1716595|1716705 hsa-miR-4489 1 0 0
chr4:1716595|1716705 hsa-miR-4507 1 0 0
chr4:1716595|1716705 hsa-miR-4516 1 0 0
chr4:1716595|1716705 hsa-miR-4534 1 1 0
chr4:1716595|1716705 hsa-miR-1587 1 0 0
chr4:1716595|1716705 hsa-miR-4651 1 0 0
chr4:1716595|1716705 hsa-miR-4654 1 1 0
chr4:1716595|1716705 hsa-miR-4656 1 0 0
chr4:1716595|1716705 hsa-miR-4688 1 0 0
chr4:1716595|1716705 hsa-miR-4689 1 0 0
chr4:1716595|1716705 hsa-miR-4739 1 0 0
chr4:1716595|1716705 hsa-miR-4741 1 1 0
chr4:1716595|1716705 hsa-miR-5194 1 0 0
chr4:1716595|1716705 hsa-miR-5572 1 0 0
chr4:1716595|1716705 hsa-miR-5787 1 0 0
chr4:1716595|1716705 hsa-miR-6081 0 1 0
chr4:1716595|1716705 hsa-miR-6085 1 0 0
chr4:1716595|1716705 hsa-miR-6090 1 0 0
chr4:1716595|1716705 hsa-miR-7974 1 0 0
chr4:1716595|1716705 hsa-miR-8082 0 1 0
chr4:1716595|1716705 hsa-miR-8089 1 0 0
chr4:1716595|1716705 hsa-miR-4433b-3p 1 0 0
chr4:1716595|1716705 hsa-miR-92a-1-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6734-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6861-5p 1 0 0
chr4:1716595|1716705 hsa-miR-7106-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4687-3p 1 0 0
chr4:1716595|1716705 hsa-miR-6728-5p 1 1 0
chr4:1716595|1716705 hsa-miR-5187-5p 1 0 0
chr4:1716595|1716705 hsa-miR-7114-5p 1 0 0
chr4:1716595|1716705 hsa-miR-3192-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6757-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6880-5p 1 1 0
chr4:1716595|1716705 hsa-miR-4695-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4709-3p 1 0 0
chr4:1716595|1716705 hsa-miR-6890-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6741-5p 1 0 0
chr4:1716595|1716705 hsa-miR-197-5p 1 0 0
chr4:1716595|1716705 hsa-miR-8069 1 0 0
chr4:1716595|1716705 hsa-miR-6776-5p 1 1 0
chr4:1716595|1716705 hsa-miR-7108-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6742-5p 1 1 0
chr4:1716595|1716705 hsa-miR-3151-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6748-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6796-5p 1 0 0
chr4:1716595|1716705 hsa-miR-185-3p 1 0 0
chr4:1716595|1716705 hsa-miR-6805-5p 1 0 0
chr4:1716595|1716705 hsa-miR-23a-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6760-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6782-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1343-3p 0 1 0
chr4:1716595|1716705 hsa-miR-6786-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6852-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1226-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1229-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1228-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6749-5p 1 0 0
chr4:1716595|1716705 hsa-miR-149-3p 1 0 0
chr4:1716595|1716705 hsa-miR-3616-3p 0 1 0
chr4:1716595|1716705 hsa-miR-6802-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1910-5p 0 1 0
chr4:1716595|1716705 hsa-miR-1233-5p 1 1 0
chr4:1716595|1716705 hsa-miR-6769b-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6778-5p 0 1 0
chr4:1716595|1716705 hsa-miR-6812-5p 1 1 0
chr4:1716595|1716705 hsa-miR-6865-5p 0 1 0
chr4:1716595|1716705 hsa-miR-5001-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6737-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6743-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6752-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6756-5p 1 1 0
chr4:1716595|1716705 hsa-miR-6769a-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6813-5p 1 1 0
chr4:1716595|1716705 hsa-miR-6819-5p 1 1 0
chr4:1716595|1716705 hsa-miR-7110-5p 1 0 0
chr4:1716595|1716705 hsa-miR-10401-5p 1 1 0
chr4:1716595|1716705 hsa-miR-1249-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6779-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6780a-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6879-5p 1 0 0
chr4:1716595|1716705 hsa-miR-3620-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4728-5p 1 0 0
chr4:1716595|1716705 hsa-miR-10396a-5p 1 0 0
chr4:1716595|1716705 hsa-miR-328-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4632-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4701-3p 1 0 0
chr4:1716595|1716705 hsa-miR-4745-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6738-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6846-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6848-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6858-5p 1 0 0
chr4:1716595|1716705 hsa-miR-939-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4758-5p 1 0 0
chr4:1716595|1716705 hsa-miR-4769-5p 1 1 0
chr4:1716595|1716705 hsa-miR-3940-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6856-5p 1 0 0
chr4:1716595|1716705 hsa-miR-7843-5p 1 0 0
chr4:1716595|1716705 hsa-miR-1914-3p 1 0 0
chr4:1716595|1716705 hsa-miR-6855-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6766-5p 1 1 0
chr4:1716595|1716705 hsa-miR-6791-5p 1 0 0
chr4:1716595|1716705 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr4:1716595|1716705
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence LSSHCHPTQEQPLNWSQPPGSPRTAPTPQQCPLLHPT
Nucleotide Sequence CTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAACTGGTCACAGCCACCAGGAAGCCCCAGGACTGCTCCCACACCACAGCAGTGCCCTCTTCTCCATCCCACC
CircID chr4:1716595|1716705
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MPPHPGTAPQLVTATRKPQDCSHTTAVPSSPSH
Nucleotide Sequence TTGCCACCCCACCCAGGAACAGCCCCTCAACTGGTCACAGCCACCAGGAAGCCCCAGGACTGCTCCCACACCACAGCAGTGCCCTCTTCTCCATCCCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab