CircNet

General Information

circRNA Basic Information

CircID	chr4:173373390\|173374037
Strand	+
CircType	exon
Host Gene	ENSG00000164105.3;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCAAGGCATCTTTACATATGTGATTATCATAAAAACTTAATTCAGAGTGTTCGAAACAGAAGAAAGAGAAAAGGGAGTGATGATGATGGAGGTGATTCACCTGTTCAAGATATTGATACCCCAGAGGTTGATTTATACCAATTACAAGTAAATACACTTAGGAGATACAAAAGACACTTCAAGCTACCAACCAGACCAGGACTTAATAAAGCACAACTTGTTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr4:173373390\|173374037	hsa-miR-29b-1-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr4:173373390\|173374037
ORF Type	ORF1
Protein Length	52
Nucleotide Length	156
Protein Sequence	VYLLVIGINQPLGYQYLEQVNHLHHHHSLFSFFCFEHSELSFYDNHICKDAL
Nucleotide Sequence	GTGTATTTACTTGTAATTGGTATAAATCAACCTCTGGGGTATCAATATCTTGAACAGGTGAATCACCTCCATCATCATCACTCCCTTTTCTCTTTCTTCTGTTTCGAACACTCTGAATTAAGTTTTTATGATAATCACATATGTAAAGATGCCTTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr4:173373390\|173374037	NOP56	1	1	1
chr4:173373390\|173374037	ELAVL1	8	1	1
chr4:173373390\|173374037	KHDRBS1	0	0	3
chr4:173373390\|173374037	CELF2	0	2	0
chr4:173373390\|173374037	PRPF8	0	3	1
chr4:173373390\|173374037	TAF15	0	0	1
chr4:173373390\|173374037	SAFB2	0	0	1
chr4:173373390\|173374037	U2AF2	3	2	0
chr4:173373390\|173374037	DGCR8	0	0	1
chr4:173373390\|173374037	NOP58	1	0	1
chr4:173373390\|173374037	KHSRP	1	2	0
chr4:173373390\|173374037	HNRNPK	2	0	0
chr4:173373390\|173374037	PCBP2	2	0	0
chr4:173373390\|173374037	HNRNPM	1	0	0
chr4:173373390\|173374037	PTBP1	13	8	0
chr4:173373390\|173374037	HNRNPC	2	4	0
chr4:173373390\|173374037	SUGP2	0	2	0
chr4:173373390\|173374037	ZNF184	0	0	1
chr4:173373390\|173374037	HNRNPA1	0	3	0
chr4:173373390\|173374037	FXR1	0	0	1
chr4:173373390\|173374037	SND1	0	0	1
chr4:173373390\|173374037	IGF2BP1	0	0	2
chr4:173373390\|173374037	IGF2BP2	3	1	4
chr4:173373390\|173374037	TARDBP	0	1	0
chr4:173373390\|173374037	RBM47	0	1	1
chr4:173373390\|173374037	CSTF2	2	1	0
chr4:173373390\|173374037	TIAL1	0	1	0
chr4:173373390\|173374037	TIA1	0	1	0
chr4:173373390\|173374037	FBL	0	0	1
chr4:173373390\|173374037	EIF4A3	1	0	1
chr4:173373390\|173374037	AGO2	0	0	5

CircRNA Information